bcl11aa (Takifugu rubripes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTRUG00000003815 T112242_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.803 0.947
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.803 0.947
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.803 0.947
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.799 0.921
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.799 0.921
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000008981 C2H2 ZF 465 487
ENSTRUP00000008981 C2H2 ZF 493 515
ENSTRUP00000008981 C2H2 ZF 820 842
ENSTRUP00000008981 C2H2 ZF 848 870
ENSTRUP00000008981 C2H2 ZF 878 901
ENSTRUP00000008982 C2H2 ZF 458 480
ENSTRUP00000008982 C2H2 ZF 486 508
ENSTRUP00000008982 C2H2 ZF 812 834
ENSTRUP00000008982 C2H2 ZF 840 862
ENSTRUP00000008982 C2H2 ZF 870 893
ENSTRUP00000008983 C2H2 ZF 387 409
ENSTRUP00000008983 C2H2 ZF 415 437
ENSTRUP00000008983 C2H2 ZF 773 795
ENSTRUP00000008983 C2H2 ZF 801 823
ENSTRUP00000008983 C2H2 ZF 831 854
ENSTRUP00000008984 C2H2 ZF 375 397
ENSTRUP00000008984 C2H2 ZF 403 425
ENSTRUP00000008984 C2H2 ZF 761 783
ENSTRUP00000008984 C2H2 ZF 789 811
ENSTRUP00000008984 C2H2 ZF 819 842

Links

Other C2H2 ZF family TFs
Other Takifugu rubripes TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANIA_01848 Aspergillus nidulans CADANIAG00008499 D 0.000
PV10_01961 Exophiala mesophila PV10_01961 I 0.000
CIMG_07923 Coccidioides immitis CIMG_07923 I 0.000
MGYG_03046 Microsporum gypseum MGYG_03046 I 0.000
PDE_05453 Penicillium oxalicum PDE_05453 I 0.000
PDIP_71760 Penicillium digitatum PDIP_71760 I 0.000
PITC_025970 Penicillium italicum PITC_025970 I 0.000
PMAA_056220 Talaromyces marneffei PMAA_056220 I 0.000
PV04_00230 Capronia semiimmersa PV04_00230 I 0.000
PV05_09886 Exophiala xenobiotica PV05_09886 I 0.000
PV06_05595 Exophiala oligosperma PV06_05595 I 0.000
PV07_09358 Cladophialophora immunda PV07_09358 I 0.000
PV08_01386 Exophiala spinifera PV08_01386 I 0.000
PV09_07171 Verruconis gallopava PV09_07171 I 0.000
MCYG_02108 Arthroderma otae MCYG_02108 I 0.000
PV11_09346 Exophiala sideris PV11_09346 I 0.000
TEQG_01149 Trichophyton equinum TEQG_01149 I 0.000
TESG_07954 Trichophyton tonsurans TESG_07954 I 0.000
TRV_02966 Trichophyton verrucosum TRV_02966 I 0.000
UREG_02223 Uncinocarpus reesii UREG_02223 I 0.000
Z517_02285 Fonsecaea pedrosoi Z517_02285 I 0.000
Z518_04968 Rhinocladiella mackenziei Z518_04968 I 0.000
Z519_04625 Cladophialophora bantiana Z519_04625 I 0.000
AB07871.1 Alternaria brassicicola AB07871.1 I 0.000
e_gw1.00609.122.1 Aspergillus carbonarius e_gw1.00609.122.1 I 0.000
PMAA_056220 Penicillium marneffei PMAA_056220 I 0.000
CADAORAG00001789 Aspergillus oryzae CADAORAG00001789 I 0.000
MCYG_02108 Microsporum canis MCYG_02108 I 0.000
A1O1_01225 Capronia coronata A1O1_01225 I 0.000
A1O3_08807 Capronia epimyces A1O3_08807 I 0.000
A1O5_06113 Cladophialophora psammophila A1O5_06113 I 0.000
A1O7_01699 Cladophialophora yegresii A1O7_01699 I 0.000
A1O9_00139 Exophiala aquamarina A1O9_00139 I 0.000
ACLA_048970 Aspergillus clavatus CADACLAG00004962 I 0.000
CADAFLAG00001948 Aspergillus flavus CADAFLAG00001948 I 0.000
CADAFLAG00004078 Aspergillus flavus CADAFLAG00004078 I 0.000
AFUA_4G09710 Aspergillus fumigatus CADAFUAG00008093 I 0.000
CADANGAG00004451 Aspergillus niger CADANGAG00004451 I 0.000
HMPREF1541_06468 Cyphellophora europaea HMPREF1541_06468 I 0.000
ATEG_03734 Aspergillus terreus CADATEAG00005983 I 0.000
ATEG_00770 Aspergillus terreus CADATEAG00007541 I 0.000
NFIA_106320 Neosartorya fischeri CADNFIAG00009607 I 0.000
CPC735_019860 Coccidioides posadasii CPC735_019860 I 0.000
EPUS_03517 Endocarpon pusillum EPUS_03517 I 0.000
G647_10121 Cladophialophora carrionii G647_10121 I 0.000
H101_05391 Trichophyton interdigitale H101_05391 I 0.000
H102_03533 Trichophyton rubrum H102_03533 I 0.000
H105_03557 Trichophyton soudanense H105_03557 I 0.000
HMPREF1120_00298 Exophiala dermatitidis HMPREF1120_00298 I 0.000
UCRNP2_4393 Neofusicoccum parvum UCRNP2_4393 N 0.000
GSTUM_00007307001 Tuber melanosporum GSTUM_00007307001 N 0.000
MPH_07854 Macrophomina phaseolina MPH_07854 N 0.000