hic1 (Takifugu rubripes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTRUG00000004590 T112254_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hic1
M00141_2.00 		Mus musculus
RTGCCMNBN
NVNKGGCAY		 PBM
Badis et al.(2009)
Hic1_2816 		0.817 0.957
Hic1
M02933_2.00 		Mus musculus
RTGCCAVCYBRTGCCAVC
GBTGGCAYVRGBTGGCAY		 SELEX
Jolma et al.(2013)
Hic1_1 		0.817 0.957
Hic1
M02934_2.00 		Mus musculus
RTGCCAVCN
NGBTGGCAY		 SELEX
Jolma et al.(2013)
Hic1_2 		0.817 0.957
Hic1
M09003_2.00 		Mus musculus
KGGCAMCCH
DGGKTGCCM		 Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C 		0.817 0.957
HIC2
M02902_2.00 		Homo sapiens
RTGCCMVNN
NNBKGGCAY		 SELEX
Jolma et al.(2013)
HIC2_1 		0.800 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000010922 C2H2 ZF 427 449
ENSTRUP00000010922 C2H2 ZF 492 514
ENSTRUP00000010922 C2H2 ZF 520 542
ENSTRUP00000010922 C2H2 ZF 548 570
ENSTRUP00000010922 C2H2 ZF 576 598
ENSTRUP00000010923 C2H2 ZF 410 432
ENSTRUP00000010923 C2H2 ZF 475 497
ENSTRUP00000010923 C2H2 ZF 503 525
ENSTRUP00000010923 C2H2 ZF 531 553
ENSTRUP00000010923 C2H2 ZF 559 581

Links

Other C2H2 ZF family TFs
Other Takifugu rubripes TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MAZ Homo sapiens ENSG00000103495 D
Maz Mus musculus ENSMUSG00000030678 D
ENSAMEG00000014864 Ailuropoda melanoleuca ENSAMEG00000014864 I
Pvit_12096 Pogona vitticeps Pvit_12096 I
Myotis_brandtii_MAZ_10014461 Myotis brandtii Myotis_brandtii_MAZ_10014461 I
ENSBTAP00000026016-D1 Bos grunniens ENSBTAP00000026016-D1 I
ENSSTOG00000027842 Ictidomys tridecemlineatus ENSSTOG00000027842 I
MAZ Sus scrofa ENSSSCG00000025321 I
ENSSHAG00000009478 Sarcophilus harrisii ENSSHAG00000009478 I
Maz Rattus norvegicus ENSRNOG00000055082 I
MAZ Pan troglodytes ENSPTRG00000007968 I
MAZ Otolemur garnettii ENSOGAG00000033940 I
ENSNLEG00000007559 Nomascus leucogenys ENSNLEG00000007559 I
ENSGMOG00000001761 Gadus morhua ENSGMOG00000001761 I
ENSGACG00000014840 Gasterosteus aculeatus ENSGACG00000014840 I
ENSECAG00000024341 Equus caballus ENSECAG00000024341 I
MAZ Cavia porcellus ENSCPOG00000019886 I
MAZ Anolis carolinensis ENSACAG00000014698 I
ENSONIG00000011463 Oreochromis niloticus ENSONIG00000011463 N
ENSORLG00000000210 Oryzias latipes ENSORLG00000000210 N
ENSORLG00000006188 Oryzias latipes ENSORLG00000006188 N
ENSGMOG00000016794 Gadus morhua ENSGMOG00000016794 N
ENSTRUG00000004091 Takifugu rubripes ENSTRUG00000004091 N
ENSXMAG00000018598 Xiphophorus maculatus ENSXMAG00000018598 N