CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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hb
(
Drosophila virilis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0013116
T114431_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
hb
M06041_2.00
Drosophila melanogaster
WTTTTTRN
NYAAAAAW
B1H
Zhu et al.(2011)
hb_FlyReg_FBgn0001180
0.825
0.986
hb
M06042_2.00
Drosophila melanogaster
KKTTTTTTTG
CAAAAAAAMM
B1H
Zhu et al.(2011)
hb_NAR_FBgn0001180
0.825
0.986
hb
M06043_2.00
Drosophila melanogaster
KBBDTTTTTTAHK
MDTAAAAAAHVVM
B1H
Zhu et al.(2011)
hb_SANGER_2.5_FBgn0001180
0.825
0.986
hb
M06044_2.00
Drosophila melanogaster
BBNDTTTTTTR
YAAAAAAHNVV
B1H
Zhu et al.(2011)
hb_SOLEXA_5_FBgn0001180
0.825
0.986
hb
M09660_2.00
Drosophila melanogaster
KTTTTTTRNB
VNYAAAAAAM
Misc
Kulakovskiy et al.(2009)
hb
0.825
0.986
hb
M10370_2.00
Drosophila melanogaster
HTTTTTDBKS
SMVHAAAAAH
Transfac
Matys et al.(2006)
I$HB_01
0.825
0.986
hb
M08450_2.00
Drosophila melanogaster
HTTTTTDBKS
SMVHAAAAAH
COMPILED
Mathelier et al.(2014)
MA0049.1
0.825
0.986
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0239005
C2H2 ZF
261
283
YKCKTCGVVAITKVDFWAHTRTH
FBpp0239005
C2H2 ZF
290
312
LQCAKCPFVTEFKHHLEYHIRKH
FBpp0239005
C2H2 ZF
318
340
FQCDKCSYTCVNKSMLNSHRKSH
FBpp0239005
C2H2 ZF
346
370
YRCADCDYATKYCHSFKLHLRKYGH
FBpp0239005
C2H2 ZF
763
785
YECKYCDIYFKDAVLYTIHMGYH
FBpp0239005
C2H2 ZF
791
815
FKCNMCGEKCDGPVGLFVHMARNAH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila virilis
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O5_02224
Cladophialophora psammophila
A1O5_02224
N
A1O7_07169
Cladophialophora yegresii
A1O7_07169
N
A1O9_01803
Exophiala aquamarina
A1O9_01803
N
G647_02937
Cladophialophora carrionii
G647_02937
N
PV04_07589
Capronia semiimmersa
PV04_07589
N
PV05_05084
Exophiala xenobiotica
PV05_05084
N
PV11_00720
Exophiala sideris
PV11_00720
N
Z517_02566
Fonsecaea pedrosoi
Z517_02566
N
Z518_09340
Rhinocladiella mackenziei
Z518_09340
N
Z519_11751
Cladophialophora bantiana
Z519_11751
N