CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GH21701
(
Drosophila grimshawi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0129162
T115434_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CG3065
M06134_2.00
Drosophila melanogaster
RCCACGCCCMY
RKGGGCGTGGY
B1H
Zhu et al.(2011)
CG3065_F1-3_SANGER_2.5_FBgn0034946
0.811
0.957
CG3065
M06135_2.00
Drosophila melanogaster
NNRCCACGCCCMCNN
NNGKGGGCGTGGYNN
B1H
Zhu et al.(2011)
CG3065_F1-3_SOLEXA_2.5_FBgn0034946
0.811
0.957
CG3065
M06136_2.00
Drosophila melanogaster
NNRCCACGCCCMYH
DRKGGGCGTGGYNN
B1H
Zhu et al.(2011)
CG3065_F1-5_SOLEXA_2.5_FBgn0034946
0.811
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0155607
C2H2 ZF
131
155
FVCPYDNCTKSYGKSSHLRSHLTWH
FBpp0155607
C2H2 ZF
161
185
FVCSEPKCGKGFTRSDELNRHLRTH
FBpp0155607
C2H2 ZF
191
213
FECMQCSKKFSRSDHLTKHLATH
FBpp0155607
C2H2 ZF
376
398
FRCRHCEKRFKRQDDLNRHIRTH
FBpp0155607
C2H2 ZF
404
426
YACNQCCRRFVRSDHLKKHQQTH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila grimshawi
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HNAJ_0000425901
Hymenolepis nana
HNAJ_0000425901
N