CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GM18118
(
Drosophila sechellia
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0173025
T116097_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CG3407
M06130_2.00
Drosophila melanogaster
MHGTCAASM
KSTTGACDK
B1H
Zhu et al.(2011)
CG3407_SANGER_2.5_FBgn0031573
0.825
0.986
CG3407
M06131_2.00
Drosophila melanogaster
DWGTCAASHVNNVNNNNNNNNNVVN
NBBNNNNNNNNNBNNBDSTTGACWH
B1H
Zhu et al.(2011)
CG3407_SOLEXA_2.5_FBgn0031573
0.825
0.986
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0199595
C2H2 ZF
495
517
HFCDKCNRDFNSYNALKYHQYTH
FBpp0199595
C2H2 ZF
523
545
HKCESCERSFYTQSALKAHERTH
FBpp0199595
C2H2 ZF
551
574
FKCDKCDFQFRQWGDLKYHIISRH
FBpp0199595
C2H2 ZF
580
602
HMCEFCGKSFSRRYSLVVHRRIH
FBpp0199595
C2H2 ZF
608
630
YACQYCDKTFRASSYLLSHIKVH
FBpp0199595
C2H2 ZF
636
658
YECSICEKKFRVSGDLKRHSRIH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila sechellia
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L892_g3306
Steinernema scapterisci
L892_g3306
N