CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GM26826
(
Drosophila sechellia
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0181676
T116220_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sqz
M06109_2.00
Drosophila melanogaster
KTTTTTTTBDTDNDBB
VVHNHAHVAAAAAAAM
B1H
Zhu et al.(2011)
sqz_SANGER_5_FBgn0010768
0.827
1.000
sqz
M06110_2.00
Drosophila melanogaster
NNNKTTTTTTDBNBN
NVNVHAAAAAAMNNN
B1H
Zhu et al.(2011)
sqz_SOLEXA_5_FBgn0010768
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0208303
C2H2 ZF
162
184
YKCGSCSKSFANSSYLSQHTRIH
FBpp0208303
C2H2 ZF
190
212
YRCEICQRKFTQLSHLQQHIRTH
FBpp0208303
C2H2 ZF
218
242
YKCRHAGCPKAFSQLSNLQSHSRCH
FBpp0208303
C2H2 ZF
248
270
FKCNSCYKCFSDEMTLLEHIPKH
FBpp0208303
C2H2 ZF
279
301
HICNLCGKSYTQETYLQKHLQKH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila sechellia
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
sqz
Drosophila melanogaster
FBgn0010768
D
0.827
sqz
Drosophila pseudoobscura
FBgn0078967
I
0.825
GF16538
Drosophila ananassae
FBgn0093559
I
0.825
GG23160
Drosophila erecta
FBgn0115312
I
0.827
GH17362
Drosophila grimshawi
FBgn0124832
I
0.779
GI23901
Drosophila mojavensis
FBgn0146626
I
0.777
GL12634
Drosophila persimilis
FBgn0150240
I
0.825
GD19275
Drosophila simulans
FBgn0190778
I
0.827
GJ23994
Drosophila virilis
FBgn0211081
I
0.777
GK13799
Drosophila willistoni
FBgn0215807
I
0.817
GE25586
Drosophila yakuba
FBgn0242649
I
0.827
LCUP016103
Lucilia cuprina
LCUP016103
I
0.815
MDOA003639
Musca domestica
MDOA003639
I
0.815