GA28112 (Drosophila pseudoobscura)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0249475 T117200_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sens
M03666_2.00 		Drosophila melanogaster
TGCWSTGATTTATY
RATAAATCASWGCA		 SELEX
Nitta et al.(2015)
sens_1 		0.825 0.989
sens
M06056_2.00 		Drosophila melanogaster
AAATCACDGC
GCHGTGATTT		 B1H
Zhu et al.(2011)
sens_SANGER_10_FBgn0002573 		0.825 0.989
sens
M06057_2.00 		Drosophila melanogaster
NNNNAAATCACRGCH
DGCYGTGATTTNNNN		 B1H
Zhu et al.(2011)
sens_SOLEXA_5_FBgn0002573 		0.825 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0285853 C2H2 ZF 76 98
FBpp0285853 C2H2 ZF 104 126
FBpp0285853 C2H2 ZF 144 166
FBpp0285853 C2H2 ZF 172 195

Links

Other C2H2 ZF family TFs
Other Drosophila pseudoobscura TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_1BS_613E9DBA6 Triticum aestivum Traes_1BS_613E9DBA6 N
TRAES3BF181700010CFD_g Triticum aestivum TRAES3BF181700010CFD_g N
Traes_3DS_31B0043F6 Triticum aestivum Traes_3DS_31B0043F6 N
Traes_5AL_DB9E0AA8D Triticum aestivum Traes_5AL_DB9E0AA8D N
Traes_6AS_073DEE100 Triticum aestivum Traes_6AS_073DEE100 N
Traes_6AS_E6F39D946 Triticum aestivum Traes_6AS_E6F39D946 N
Traes_6BS_276ACF176 Triticum aestivum Traes_6BS_276ACF176 N
Traes_6BS_945FD8DAC1 Triticum aestivum Traes_6BS_945FD8DAC1 N
Traes_6BS_A3531CD43 Triticum aestivum Traes_6BS_A3531CD43 N
Traes_6BS_B8A0BF56F Triticum aestivum Traes_6BS_B8A0BF56F N
Traes_6BS_EE1BBAFD1 Triticum aestivum Traes_6BS_EE1BBAFD1 N
TRIUR3_06344 Triticum urartu TRIUR3_06344 N