CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GB53867
(
Apis mellifera
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GB53867
T118062_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Snai1
M00781_2.00
Mus musculus
NNNTGTCANN
NNTGACANNN
PBM
Weirauch et al.(2013)
pTH2340
0.758
0.813
Snai1
M09002_2.00
Mus musculus
VCACCTGB
VCAGGTGB
Misc
Kulakovskiy et al.(2013)
SNAI1_MOUSE.H11MO.0.C
0.758
0.813
SNAI1
M04441_2.00
Homo sapiens
NVCACCTGYN
NRCAGGTGBN
SELEX
Yin et al.(2017)
SNAI1_eDBD_HT-SELEX
0.758
0.802
SNAI1
M04443_2.00
Homo sapiens
TRCACCTGYN
NRCAGGTGYA
SELEX
Yin et al.(2017)
SNAI1_FL_HT-SELEX
0.758
0.802
SNAI1
M08303_2.00
Homo sapiens
NNNNGCACCTGCYNB
VNRGCAGGTGCNNNN
ChIP-seq
Schmitges et al.(2016)
O95863.MEME
0.758
0.802
SNAI1
M08886_2.00
Homo sapiens
VCACCTGB
VCAGGTGB
Misc
Kulakovskiy et al.(2013)
SNAI1_HUMAN.H11MO.0.C
0.758
0.802
SNAI1
M10201_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SNA_Q4
0.758
0.802
SNAI1
M10202_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SNA_Q6
0.758
0.802
SNAI1
M04442_2.00
Homo sapiens
NRCACCTGYN
NRCAGGTGYN
SELEX
Yin et al.(2017)
SNAI1_eDBD_Methyl-HT-SELEX
0.758
0.802
SNAI1
M04444_2.00
Homo sapiens
YRCACCTGYN
NRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI1_FL_Methyl-HT-SELEX
0.758
0.802
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GB53867-PA
C2H2 ZF
349
371
FSCKYCEKVYVSLGALKMHIRTH
GB53867-PA
C2H2 ZF
375
397
CKCHLCGKAFSRPWLLQGHIRTH
GB53867-PA
C2H2 ZF
403
425
FSCQHCNRAFADRSNLRAHLQTH
GB53867-PA
C2H2 ZF
431
452
YSCTSCSKTFSRMSLLTKHQEG
Links
Other
C2H2 ZF
family TFs
Other
Apis mellifera
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Snai1
Mus musculus
ENSMUSG00000042821
D
0.758
SNAI1
Homo sapiens
ENSG00000124216
D
0.758
SNAI1
Pteropus vampyrus
ENSPVAG00000004119
I
0.758
ENSNLEG00000006985
Nomascus leucogenys
ENSNLEG00000006985
I
0.758
ENSOARG00000013174
Ovis aries
ENSOARG00000013174
I
0.758
SNAI1
Otolemur garnettii
ENSOGAG00000030111
I
0.758
ENSPANG00000007536
Papio anubis
ENSPANG00000007536
I
0.758
SNAI1
Procavia capensis
ENSPCAG00000011934
I
0.758
SNAI1
Pan troglodytes
ENSPTRG00000013614
I
0.758
ENSMPUG00000017558
Mustela putorius furo
ENSMPUG00000017558
I
0.758
Snai1
Rattus norvegicus
ENSRNOG00000009594
I
0.758
ENSSTOG00000005866
Ictidomys tridecemlineatus
ENSSTOG00000005866
I
0.758
SNAI1
Tupaia belangeri
ENSTBEG00000012262
I
0.758
SNAI1
Tursiops truncatus
ENSTTRG00000002029
I
0.758
GM16048
Drosophila sechellia
FBgn0170964
I
0.817
ENSBTAP00000019345-D1
Bos grunniens
ENSBTAP00000019345-D1
I
0.758
Myotis_brandtii_SNAI1_10026379
Myotis brandtii
Myotis_brandtii_SNAI1_10026379
I
0.757
ENSAMEG00000013478
Ailuropoda melanoleuca
ENSAMEG00000013478
I
0.758
ENSMMUG00000019719
Macaca mulatta
ENSMMUG00000019719
I
0.758
ENSMLUG00000015053
Myotis lucifugus
ENSMLUG00000015053
I
0.758
ENSMICG00000011160
Microcebus murinus
ENSMICG00000011160
I
0.758
SNAI1
Loxodonta africana
ENSLAFG00000030265
I
0.770
SNAI1
Gorilla gorilla
ENSGGOG00000024422
I
0.758
SNAI1
Felis catus
ENSFCAG00000010558
I
0.770
ENSETEG00000016371
Echinops telfairi
ENSETEG00000016371
I
0.758
SNAI1
Equus caballus
ENSECAG00000009787
I
0.758
SNAI1
Dasypus novemcinctus
ENSDNOG00000023834
I
0.758
ENSCSAG00000015065
Chlorocebus sabaeus
ENSCSAG00000015065
I
0.758
SNAI1
Cavia porcellus
ENSCPOG00000026663
I
0.758
SNAI1
Callithrix jacchus
ENSCJAG00000000518
I
0.758
SNAI1
Canis familiaris
ENSCAFG00000011499
I
0.758
SNAI1
Bos taurus
ENSBTAG00000014554
I
0.758