CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GGTG_01315
(
Gaeumannomyces graminis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GGTG_01315
T118089_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
csp-1
M01876_2.00
Neurospora crassa
NNDWCCCYDN
NHRGGGWHNN
PBM
Weirauch et al.(2014)
pTH9015
0.798
0.935
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GGTG_01315T0
C2H2 ZF
151
178
YPCRYRDSHGCEKTFTTSGHASRHSKIH
GGTG_01315T0
C2H2 ZF
184
208
VQCTHPGCSKKFTRADNMKQHLETH
Links
Other
C2H2 ZF
family TFs
Other
Gaeumannomyces graminis
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CY34DRAFT_806544
Suillus luteus
CY34DRAFT_806544
N
HYDPIDRAFT_117459
Hydnomerulius pinastri
HYDPIDRAFT_117459
N
JAAARDRAFT_30709
Jaapia argillacea
JAAARDRAFT_30709
N
SCLCIDRAFT_1222781
Scleroderma citrinum
SCLCIDRAFT_1222781
N
SERLA73DRAFT_145018
Serpula lacrymans
SERLA73DRAFT_145018
N