GLYMA13G19560 (Glycine max)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GLYMA13G19560 T118409_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.777 0.818
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.777 0.818
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.766 0.750
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.762 0.750
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.762 0.750
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.761 0.750
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA13G19560.1 C2H2 ZF 41 61
GLYMA13G19560.1 C2H2 ZF 94 116

Links

Other C2H2 ZF family TFs
Other Glycine max TFs

278 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
IKZF2 Homo sapiens ENSG00000030419 D
IKZF2 Callithrix jacchus ENSCJAG00000011409 I
IKZF2 Macaca mulatta ENSMMUG00000000381 I
Ikzf2 Mus musculus ENSMUSG00000025997 I
IKZF2 Bos taurus ENSBTAG00000037804 N
ENSCJAG00000033095 Callithrix jacchus ENSCJAG00000033095 N
IKZF4 Monodelphis domestica ENSMODG00000001780 N
si:zfos-1425h8.1 Oryzias latipes ENSORLG00000016031 N
si:zfos-1425h8.1 Takifugu rubripes ENSTRUG00000014740 N
IKZF2 Tursiops truncatus ENSTTRG00000003213 N