GSMUA_Achr1G01260_001 (Musa acuminata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GSMUA_Achr1G01260_001 T118671_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.797 0.848
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.791 0.826
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.791 0.826
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.780 0.696
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.780 0.696
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.777 0.717
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.766 0.739
AT3G46070
M06813_2.00 		Arabidopsis thaliana
HYHHYHTCACTYHHH
DDDRAGTGADRDDRD		 Dap-seq
OMalley et al.(2016)
AT3G46070_col_a 		0.757 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr1P01260_001 C2H2 ZF 35 57
GSMUA_Achr1P01260_001 C2H2 ZF 73 95

Links

Other C2H2 ZF family TFs
Other Musa acuminata TFs

368 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HAA1 Saccharomyces cerevisiae YPR008W D
CUP2 Saccharomyces cerevisiae YGL166W D
LALA0_S09e06546g Lachancea lanzarotensis LALA0_S09e06546g I
KUCA_T00002063001 Kuraishia capsulata KUCA_T00002063001 I
LELG_03555 Lodderomyces elongisporus LELG_03555 I
NCAS_0B05730 Naumovozyma castellii NCAS_0B05730 I
NDAI_0B03070 Naumovozyma dairenensis NDAI_0B03070 I
PAS_chr3_0232 Komagataella pastoris PAS_chr3_0232 I
PGUG_05595 Meyerozyma guilliermondii PGUG_05595 I
PICST_66716 Scheffersomyces stipitis PICST_66716 I
SKUD_166403 Saccharomyces kudriavzevii SKUD_166403 I
SU7_3622 Saccharomyces arboricola SU7_3622 I
TBLA_0C00170 Tetrapisispora blattae TBLA_0C00170 I
TDEL_0C01350 Torulaspora delbrueckii TDEL_0C01350 I
TPHA_0D00690 Tetrapisispora phaffii TPHA_0D00690 I
YALI0_B08206g Yarrowia lipolytica YALI0_B08206g I
ZBAI_01494 Zygosaccharomyces bailii ZBAI_01494 I
ZYRO0F04862g Zygosaccharomyces rouxii ZYRO0F04862g I
estExt_fgenesh1_pg.C_chr_1.20386 Pichia stipitis estExt_fgenesh1_pg.C_chr_1.20386 I
Scas_Contig710.11 Saccharomyces castellii Scas_Contig710.11 I
22312_YPR008W Saccharomyces mikatae 22312_YPR008W I
23384_YPR008W Saccharomyces paradoxus 23384_YPR008W I
25568_YPR008W Saccharomyces bayanus 25568_YPR008W I
KLTH0G16984g Kluyveromyces thermotolerans KLTH0G16984g I
Kwal_1543 Kluyveromyces waltii Kwal_1543 I
SAKL0B03344g Lachancea kluyveri SAKL0B03344g I
XP_002492448.1 Pichia pastoris XP_002492448.1 I
DEHA2D05500g Debaryomyces hansenii DEHA2D05500g I
CPAG_03050 Candida parapsilosis CPAG_03050 I
PGUG_05595 Candida guilliermondii PGUG_05595 I
AACERI_AaceriAEL295C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAEL295C I
AGOS_AEL295C Ashbya gossypii AGOS_AEL295C I
BN7_4399 Wickerhamomyces ciferrii BN7_4399 I
CAGL0L09339g Candida glabrata CAGL0L09339g I
CANTEDRAFT_114577 Candida tenuis CANTEDRAFT_114577 I
CaO19.12468 Candida albicans CaO19.12468 I
CaO19.5001 Candida albicans CaO19.5001 I
CD36_12620 Candida dubliniensis CD36_12620 I
CLUG_03246 Clavispora lusitaniae CLUG_03246 I
CORT_0D01560 Candida orthopsilosis CORT_0D01560 I
CTRG_03632 Candida tropicalis CTRG_03632 I
CLUG_03246 Candida lusitaniae CLUG_03246 I
Ecym_6116 Eremothecium cymbalariae Ecym_6116 I
G210_3644 Candida maltosa G210_3644 I
GNLVRS01_PISO0A06138g Millerozyma farinosa GNLVRS01_PISO0A06138g I
GNLVRS01_PISO0B06205g Millerozyma farinosa GNLVRS01_PISO0B06205g I
JL09_g2035 Pichia kudriavzevii JL09_g2035 I
JL09_g5487 Pichia kudriavzevii JL09_g5487 I
KAFR_0B01950 Kazachstania africana KAFR_0B01950 I
KLLA0_A03047g Kluyveromyces lactis KLLA0_A03047g I
KLTH0G16984g Lachancea thermotolerans KLTH0G16984g I
KNAG_0D02340 Kazachstania naganishii KNAG_0D02340 I
Kpol_467p5 Vanderwaltozyma polyspora Kpol_467p5 I
Kpol_541p30 Vanderwaltozyma polyspora Kpol_541p30 I