GSMUA_Achr5G08730_001 (Musa acuminata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GSMUA_Achr5G08730_001 T118706_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.784 0.652
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.782 0.848
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.766 0.783
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.766 0.783
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.763 0.826
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.759 0.652
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.759 0.630
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.757 0.761
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.757 0.761
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.757 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr5P08730_001 C2H2 ZF 82 104
GSMUA_Achr5P08730_001 C2H2 ZF 135 157

Links

Other C2H2 ZF family TFs
Other Musa acuminata TFs

305 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF518B Vicugna pacos ENSVPAG00000001202 N
ENSNLEG00000016204 Nomascus leucogenys ENSNLEG00000016204 N
ZNF518B Ornithorhynchus anatinus ENSOANG00000013888 N
ZNF518B Otolemur garnettii ENSOGAG00000029956 N
ENSPANG00000002997 Papio anubis ENSPANG00000002997 N
ZNF518B Procavia capensis ENSPCAG00000013765 N
ENSPSIG00000013251 Pelodiscus sinensis ENSPSIG00000013251 N
ZNF518B Pan troglodytes ENSPTRG00000015917 N
ZNF518B Pteropus vampyrus ENSPVAG00000003696 N
Zfp518b Rattus norvegicus ENSRNOG00000028534 N
ZNF518B Sus scrofa ENSSSCG00000029711 N
Zfp518b Mus musculus ENSMUSG00000046572 N
Aan_R008583 Calypte anna Aan_R008583 N
Afo_R009830 Aptenodytes forsteri Afo_R009830 N
Brh_R003491 Buceros rhinoceros Brh_R003491 N
Cmyd_10009688 Chelonia mydas Cmyd_10009688 N
ENSP00000317614-D1 Bos grunniens ENSP00000317614-D1 N
ENSP00000317614 Macaca fascicularis ENSP00000317614 N
Gfo_R010300 Geospiza fortis Gfo_R010300 N
Ogr09561 Ophisaurus gracilis Ogr09561 N
Tal_R010480 Tyto alba Tal_R010480 N
ZNF518B Felis catus ENSFCAG00000030856 N
ENSAPLG00000016167 Anas platyrhynchos ENSAPLG00000016167 N
ENSBTAG00000039871 Bos taurus ENSBTAG00000039871 N
ZNF518B Canis familiaris ENSCAFG00000015463 N
ZNF518B Choloepus hoffmanni ENSCHOG00000010179 N
ZNF518B Callithrix jacchus ENSCJAG00000022790 N
ZNF518B Cavia porcellus ENSCPOG00000026360 N
ENSCSAG00000019700 Chlorocebus sabaeus ENSCSAG00000019700 N
ZNF518B Dasypus novemcinctus ENSDNOG00000038140 N
ZNF518B Erinaceus europaeus ENSEEUG00000015023 N
ENSFALG00000014741 Ficedula albicollis ENSFALG00000014741 N
ENSAMEG00000019338 Ailuropoda melanoleuca ENSAMEG00000019338 N
ZNF518B Homo sapiens ENSG00000178163 N
ZNF518B Gallus gallus ENSGALG00000014954 N
ZNF518B Gorilla gorilla ENSGGOG00000003355 N
ZNF518B Loxodonta africana ENSLAFG00000013802 N
ENSMEUG00000013185 Macropus eugenii ENSMEUG00000013185 N
ZNF518B Meleagris gallopavo ENSMGAG00000012687 N
ENSMICG00000005284 Microcebus murinus ENSMICG00000005284 N
ZNF518B Macaca mulatta ENSMMUG00000017761 N
ENSMPUG00000019802 Mustela putorius furo ENSMPUG00000019802 N