CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GYMLUDRAFT_48183
(
Gymnopus luxurians
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GYMLUDRAFT_48183
T118889_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_114363
M01461_2.00
Schizophyllum commune
NGATCBDCR
YGHVGATCN
PBM
Najafabadi et al.(2015a)
pTH11153
0.776
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIK54980
C2H2 ZF
83
105
HVCTECYKRFNRPSSLRIHENTH
KIK54980
C2H2 ZF
111
135
FRCPYPGCGRRFNVSSNMRRHYRKH
Links
Other
C2H2 ZF
family TFs
Other
Gymnopus luxurians
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCHCODRAFT_114363
Schizophyllum commune
SCHCODRAFT_114363
D
0.776
CC1G_08877
Coprinopsis cinerea
CC1G_08877
I
0.771
K443DRAFT_684663
Laccaria amethystina
K443DRAFT_684663
I
0.771
LACBIDRAFT_295582
Laccaria bicolor
LACBIDRAFT_295582
I
0.771