CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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JAAARDRAFT_112445
(
Jaapia argillacea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
JAAARDRAFT_112445
T120152_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_258883
M01464_2.00
Schizophyllum commune
NNCCCCTDD
HHAGGGGNN
PBM
Najafabadi et al.(2015a)
pTH10244
0.768
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KDQ62935
C2H2 ZF
35
60
YMCSVKDCGKCFARGEHLKRHVRSIH
KDQ62935
C2H2 ZF
66
90
HRCPYPGCGKDFSRHDNLGQHMRVH
Links
Other
C2H2 ZF
family TFs
Other
Jaapia argillacea
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCHCODRAFT_258883
Schizophyllum commune
SCHCODRAFT_258883
D
0.768
M378DRAFT_213370
Amanita muscaria
M378DRAFT_213370
I
0.762
fgenesh2_pg.C_scaffold_1000086
Heterobasidion annosum
fgenesh2_pg.C_scaffold_1000086
I
0.768
SERLA73DRAFT_115823
Serpula lacrymans
SERLA73DRAFT_115823
I
0.768
SCLCIDRAFT_1207253
Scleroderma citrinum
SCLCIDRAFT_1207253
I
0.782
POSPLDRAFT_106184
Postia placenta
POSPLDRAFT_106184
I
0.768
PISMIDRAFT_58693
Pisolithus microcarpus
PISMIDRAFT_58693
I
0.782
PAXRUDRAFT_128990
Paxillus rubicundulus
PAXRUDRAFT_128990
I
0.758
PAXINDRAFT_86770
Paxillus involutus
PAXINDRAFT_86770
I
0.758
M404DRAFT_57116
Pisolithus tinctorius
M404DRAFT_57116
I
0.782
AGABI2DRAFT_189243
Agaricus bisporus
AGABI2DRAFT_189243
I
0.792
LACBIDRAFT_301563
Laccaria bicolor
LACBIDRAFT_301563
I
0.768
K443DRAFT_132577
Laccaria amethystina
K443DRAFT_132577
I
0.768
GLOTRDRAFT_30797
Gloeophyllum trabeum
GLOTRDRAFT_30797
I
0.768
FOMPIDRAFT_1133812
Fomitopsis pinicola
FOMPIDRAFT_1133812
I
0.792
FIBRA_04875
Fibroporia radiculosa
FIBRA_04875
I
0.810
CY34DRAFT_41572
Suillus luteus
CY34DRAFT_41572
I
0.782
CERSUDRAFT_79927
Ceriporiopsis subvermispora
CERSUDRAFT_79927
I
0.792
CC1G_13761
Coprinopsis cinerea
CC1G_13761
I
0.768
BN946_scf184576.g4
Trametes cinnabarina
BN946_scf184576.g4
I
0.792