CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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JL09_g2270
(
Pichia kudriavzevii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
JL09_g2270
T120224_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
rst2
M01186_2.00
Schizosaccharomyces pombe
NNCCCCDCNN
NNGHGGGGNN
PBM
Lambert et al.(2019)
pTH11144
0.771
0.783
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KGK38575
C2H2 ZF
35
57
FVCATCTRAFARHEHLKRHERSH
KGK38575
C2H2 ZF
63
86
FTCNICSRKFSRRDLLLRHSTKLH
Links
Other
C2H2 ZF
family TFs
Other
Pichia kudriavzevii
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
rst2
Schizosaccharomyces pombe
SPAC6F12.02
D
0.771
BN7_2345
Wickerhamomyces ciferrii
BN7_2345
N
0.771
HPODL_00650
Ogataea parapolymorpha
HPODL_00650
N
0.757