CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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K443DRAFT_671198
(
Laccaria amethystina
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
K443DRAFT_671198
T120313_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_110420
M01458_2.00
Schizophyllum commune
VCGCCACNNN
NNNGTGGCGB
PBM
Najafabadi et al.(2015a)
pTH10238
0.773
0.844
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIK09888
C2H2 ZF
145
167
FSCDLCALSFNRQHDLKRHRETH
KIK09888
C2H2 ZF
173
195
FVCNGGCGKTFTRKDALKRHQLV
Links
Other
C2H2 ZF
family TFs
Other
Laccaria amethystina
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O5_05701
Cladophialophora psammophila
A1O5_05701
N
Z517_09558
Fonsecaea pedrosoi
Z517_09558
N
Z519_11149
Cladophialophora bantiana
Z519_11149
N