LotgiG68213 (Lottia gigantea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 LotgiG68213 T121815_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FEZF1
M08307_2.00 		Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN		 ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE 		0.792 0.899
FEZF1
M08889_2.00 		Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH		 Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C 		0.792 0.899
erm
M03686_2.00 		Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA		 SELEX
Nitta et al.(2015)
CG31670_1 		0.790 0.906
erm
M06128_2.00 		Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM		 B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375 		0.790 0.906
erm
M06129_2.00 		Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV		 B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375 		0.790 0.906
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP68213 C2H2 ZF 5 27
LotgiP68213 C2H2 ZF 33 55
LotgiP68213 C2H2 ZF 61 83
LotgiP68213 C2H2 ZF 89 111
LotgiP68213 C2H2 ZF 117 139
LotgiP68213 C2H2 ZF 145 168

Links

Other C2H2 ZF family TFs
Other Lottia gigantea TFs

170 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PHUM221110 Pediculus humanus PHUM221110 I 0.000
AMEC002017 Anopheles melas AMEC002017 N 0.000
ACUA001624 Anopheles culicifacies ACUA001624 N 0.000
ACUA013501 Anopheles culicifacies ACUA013501 N 0.000
ADIR000747 Anopheles dirus ADIR000747 N 0.000
ADIR000749 Anopheles dirus ADIR000749 N 0.000
AEPI000388 Anopheles epiroticus AEPI000388 N 0.000
AEPI000391 Anopheles epiroticus AEPI000391 N 0.000
AFAF015377 Anopheles farauti AFAF015377 N 0.000
AFAF016537 Anopheles farauti AFAF016537 N 0.000
AFUN010324 Anopheles funestus AFUN010324 N 0.000
AFUN010327 Anopheles funestus AFUN010327 N 0.000
AMAM001181 Anopheles maculatus AMAM001181 N 0.000
AMAM021192 Anopheles maculatus AMAM021192 N 0.000
ACOM030952 Anopheles coluzzii ACOM030952 N 0.000
AMEC011119 Anopheles melas AMEC011119 N 0.000
AMEM007634 Anopheles merus AMEM007634 N 0.000
AMEM014363 Anopheles merus AMEM014363 N 0.000
AMIN006409 Anopheles minimus AMIN006409 N 0.000
AMIN006412 Anopheles minimus AMIN006412 N 0.000
AQUA003680 Anopheles quadriannulatus AQUA003680 N 0.000
AQUA014420 Anopheles quadriannulatus AQUA014420 N 0.000
ASIS001250 Anopheles sinensis ASIS001250 N 0.000
ASTEI01637 Anopheles stephensi ASTEI01637 N 0.000
nLs.2.1.2.g01927 Litomosoides sigmodontis nLs.2.1.2.g01927 N 0.000
TC003170 Tribolium castaneum TC003170 N 0.000
AAEL001652 Aedes aegypti AAEL001652 N 0.000
ACEP11448 Atta cephalotes ACEP11448 N 0.000
ADAC000872 Anopheles darlingi ADAC000872 N 0.000
AGAP007822 Anopheles gambiae AGAP007822 N 0.000
AGAP007824 Anopheles gambiae AGAP007824 N 0.000
CPIJ000953 Culex quinquefasciatus CPIJ000953 N 0.000
DAPPUDRAFT_45040 Daphnia pulex DAPPUDRAFT_45040 N 0.000
GB41320 Apis mellifera GB41320 N 0.000
ISCW003677 Ixodes scapularis ISCW003677 N 0.000
L798_14385 Zootermopsis nevadensis L798_14385 N 0.000
SINV12291 Solenopsis invicta SINV12291 N 0.000
ACOM030968 Anopheles coluzzii ACOM030968 N 0.000
YQE_07457 Dendroctonus ponderosae YQE_07457 N 0.000
Cflo_10835--XP_001121050.1_APIME Camponotus floridanus Cflo_10835--XP_001121050.1_APIME N 0.000
LDEC024027 Leptinotarsa decemlineata LDEC024027 N 0.000
AALB001157 Anopheles albimanus AALB001157 N 0.000
AARA012018 Anopheles arabiensis AARA012018 N 0.000
AARA012021 Anopheles arabiensis AARA012021 N 0.000
AATE014155 Anopheles atroparvus AATE014155 N 0.000
AATE016471 Anopheles atroparvus AATE016471 N 0.000
ACHR000531 Anopheles christyi ACHR000531 N 0.000
ACHR003205 Anopheles christyi ACHR003205 N 0.000
CpipJ_CPIJ000953 Culex pipiens CpipJ_CPIJ000953 N 0.000