CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MESCA001237
(
Megaselia scalaris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
MESCA001237
T123170_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Glis2
M00129_2.00
Mus musculus
NKACCCCYYNN
NNRRGGGGTMN
PBM
Badis et al.(2009)
Glis2_1757
0.762
0.824
GLIS2
M02887_2.00
Homo sapiens
KACCCCCCRCRDHG
CDHYGYGGGGGGTM
SELEX
Jolma et al.(2013)
GLIS2_1
0.762
0.824
GLIS2
M04449_2.00
Homo sapiens
RCCCCCCRCRWHGH
DCDWYGYGGGGGGY
SELEX
Yin et al.(2017)
GLIS2_eDBD_HT-SELEX
0.762
0.824
GLIS2
M04450_2.00
Homo sapiens
DCWHYGYDGGGGGT
ACCCCCHRCRDWGH
SELEX
Yin et al.(2017)
GLIS2_eDBD_Methyl-HT-SELEX
0.762
0.824
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MESCA001237-PA
C2H2 ZF
1
22
MCQLCQKCFSRAENLKIHMRSH
MESCA001237-PA
C2H2 ZF
28
52
YVCPYEGCNKAYSNSSDRFKHTRTH
MESCA001237-PA
C2H2 ZF
58
84
YVCKVPGCQKRYTDPSSLRKHVKTFKH
Links
Other
C2H2 ZF
family TFs
Other
Megaselia scalaris
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF596
Homo sapiens
ENSG00000172748
D
ZNF596
Callithrix jacchus
ENSCJAG00000011900
I
ZNF596
Macaca mulatta
ENSMMUG00000020598
I
ENSNLEG00000014845
Nomascus leucogenys
ENSNLEG00000014845
I
ENSPANG00000024623
Papio anubis
ENSPANG00000024623
I
ENSPPYG00000018299
Pongo abelii
ENSPPYG00000018299
I
ZNF596
Pan troglodytes
ENSPTRG00000019931
I
ENSMMUP00000027112
Macaca fascicularis
ENSMMUP00000027112
I