MLOC_10987 (Hordeum vulgare)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 MLOC_10987 T123567_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP1
M06801_2.00 		Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY
RRGKDDYAHCTGGKGVAGG		 Dap-seq
OMalley et al.(2016)
STOP1_col_a 		0.803 0.929
STOP1
M06802_2.00 		Arabidopsis thaliana
RCCTNCMCCRGWWRN
NYWWCYGGKGNAGGY		 Dap-seq
OMalley et al.(2016)
STOP1_colamp_a 		0.803 0.929
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_10987.1 C2H2 ZF 356 378
MLOC_10987.1 C2H2 ZF 379 404

Links

Other C2H2 ZF family TFs
Other Hordeum vulgare TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CpipJ_CPIJ014043 Culex pipiens CpipJ_CPIJ014043 N 0.000
WUBG_12099 Wuchereria bancrofti WUBG_12099 N 0.000
AAEL011380 Aedes aegypti AAEL011380 N 0.000
ACEP16613 Atta cephalotes ACEP16613 N 0.000
ACYPI007949 Acyrthosiphon pisum ACYPI007949 N 0.000
ADAC001494 Anopheles darlingi ADAC001494 N 0.000
AGAP000005 Anopheles gambiae AGAP000005 N 0.000
BGIBMGA001132 Bombyx mori BGIBMGA001132 N 0.000
CPIJ014043 Culex quinquefasciatus CPIJ014043 N 0.000
DAPPUDRAFT_232871 Daphnia pulex DAPPUDRAFT_232871 N 0.000
EFV53345 Trichinella spiralis EFV53345 N 0.000
EFV57410 Trichinella spiralis EFV57410 N 0.000
hmg1/2 Ciona intestinalis ENSCING00000004075 N 0.000
ENSCSAVG00000000341 Ciona savignyi ENSCSAVG00000000341 N 0.000
hmgb2a Danio rerio ENSDARG00000029722 N 0.000
hmgb1b Gasterosteus aculeatus ENSGACG00000011447 N 0.000
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N 0.000
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N 0.000
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N 0.000
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N 0.000
LOC108349258 Rattus norvegicus ENSRNOG00000047496 N 0.000
LOC103694516 Rattus norvegicus ENSRNOG00000049646 N 0.000
AABR07030543.1 Rattus norvegicus ENSRNOG00000051634 N 0.000
LOC103694517 Rattus norvegicus ENSRNOG00000052269 N 0.000
RGD1561558 Rattus norvegicus ENSRNOG00000053609 N 0.000
RGD1566225 Rattus norvegicus ENSRNOG00000055742 N 0.000
AABR07045786.1 Rattus norvegicus ENSRNOG00000055923 N 0.000
LOC681067 Rattus norvegicus ENSRNOG00000057013 N 0.000
LOC691030 Rattus norvegicus ENSRNOG00000057926 N 0.000
RGD1560585 Rattus norvegicus ENSRNOG00000060534 N 0.000
HMGB2 Sus scrofa ENSSSCG00000009704 N 0.000
Dsp1 Drosophila melanogaster FBgn0011764 N 0.000
GA11488 Drosophila pseudoobscura FBgn0071539 N 0.000
GF19115 Drosophila ananassae FBgn0096126 N 0.000
GG17955 Drosophila erecta FBgn0110175 N 0.000
GH12282 Drosophila grimshawi FBgn0119761 N 0.000
GI10980 Drosophila mojavensis FBgn0133743 N 0.000
GD17278 Drosophila simulans FBgn0188840 N 0.000
GJ19445 Drosophila virilis FBgn0206588 N 0.000
GK25058 Drosophila willistoni FBgn0227017 N 0.000
GE17263 Drosophila yakuba FBgn0234741 N 0.000
GB47828 Apis mellifera GB47828 N 0.000
HelroG87827 Helobdella robusta HelroG87827 N 0.000
HMEL007340 Heliconius melpomene HMEL007340 N 0.000
NV15664 Nasonia vitripennis NV15664 N 0.000
PHUM006290 Pediculus humanus PHUM006290 N 0.000
SINV22586 Solenopsis invicta SINV22586 N 0.000
SMAR013695 Strigamia maritima SMAR013695 N 0.000
Smp_000980 Schistosoma mansoni Smp_000980 N 0.000
Smp_100090 Schistosoma mansoni Smp_100090 N 0.000
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N 0.000
tetur02g08260 Tetranychus urticae tetur02g08260 N 0.000
tetur02g08340 Tetranychus urticae tetur02g08340 N 0.000
YQE_03203 Dendroctonus ponderosae YQE_03203 N 0.000
Cflo_05895--XP_001121384.1_APIME Camponotus floridanus Cflo_05895--XP_001121384.1_APIME N 0.000
Hsal_13110--XP_001121384.1_APIME Harpegnathos saltator Hsal_13110--XP_001121384.1_APIME N 0.000
Myotis_brandtii_Hmgb1_10026956 Myotis brandtii Myotis_brandtii_Hmgb1_10026956 N 0.000
fgenesh2_pm.scaffold_24000033 Branchiostoma floridae fgenesh2_pm.scaffold_24000033 N 0.000
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N 0.000
LCUP007363 Lucilia cuprina LCUP007363 N 0.000
LDEC006842 Leptinotarsa decemlineata LDEC006842 N 0.000
Sjc_0031360 Schistosoma japonicum Sjc_0031360 N 0.000
Sjc_0051340 Schistosoma japonicum Sjc_0051340 N 0.000
SMU15002907 Schmidtea mediterranea SMU15002907 N 0.000
SMU15016767 Schmidtea mediterranea SMU15016767 N 0.000
SMU15027649 Schmidtea mediterranea SMU15027649 N 0.000
SMU15030256 Schmidtea mediterranea SMU15030256 N 0.000
Minc03268 Meloidogyne incognita Minc03268 N 0.000
Minc08988 Meloidogyne incognita Minc08988 N 0.000
AALB006743 Anopheles albimanus AALB006743 N 0.000
AARA010318 Anopheles arabiensis AARA010318 N 0.000
AATE010886 Anopheles atroparvus AATE010886 N 0.000
AATE018776 Anopheles atroparvus AATE018776 N 0.000
ACUA021022 Anopheles culicifacies ACUA021022 N 0.000
ADIR000367 Anopheles dirus ADIR000367 N 0.000
ADIR011701 Anopheles dirus ADIR011701 N 0.000
AEPI002924 Anopheles epiroticus AEPI002924 N 0.000
AFAF003948 Anopheles farauti AFAF003948 N 0.000
AFUN010134 Anopheles funestus AFUN010134 N 0.000
AMAM015540 Anopheles maculatus AMAM015540 N 0.000
AMEC021909 Anopheles melas AMEC021909 N 0.000
AMEM017336 Anopheles merus AMEM017336 N 0.000
AMIN005344 Anopheles minimus AMIN005344 N 0.000
AQUA004962 Anopheles quadriannulatus AQUA004962 N 0.000
ASIS000124 Anopheles sinensis ASIS000124 N 0.000
ASIS009950 Anopheles sinensis ASIS009950 N 0.000
MDOA008812 Musca domestica MDOA008812 N 0.000
A_00070 Schistosoma haematobium A_00070 N 0.000
ANCCAN_10156 Ancylostoma caninum ANCCAN_10156 N 0.000
ANCCEY_10333 Ancylostoma ceylanicum ANCCEY_10333 N 0.000
D915_00818 Fasciola hepatica D915_00818 N 0.000
D917_01254 Trichinella nativa D917_01254 N 0.000
DILT_0001497901 Diphyllobothrium latum DILT_0001497901 N 0.000
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N 0.000
ECANG7_07075 Echinococcus canadensis ECANG7_07075 N 0.000
EmuJ_000941400 Echinococcus multilocularis EmuJ_000941400 N 0.000
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.000
HDID_0000237901 Hymenolepis diminuta HDID_0000237901 N 0.000
HmN_000466000 Hymenolepis microstoma HmN_000466000 N 0.000
HmN_000761000 Hymenolepis microstoma HmN_000761000 N 0.000
HNAJ_0000227501 Hymenolepis nana HNAJ_0000227501 N 0.000
HNAJ_0001249801 Hymenolepis nana HNAJ_0001249801 N 0.000
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.000
MCOS_0000588101 Mesocestoides corti MCOS_0000588101 N 0.000
MhA1_Contig113.frz3.gene9 Meloidogyne hapla MhA1_Contig113.frz3.gene9 N 0.000
PXEA_0000566701 Protopolystoma xenopodis PXEA_0000566701 N 0.000
PXEA_0000637001 Protopolystoma xenopodis PXEA_0000637001 N 0.000
PXEA_0002175501 Protopolystoma xenopodis PXEA_0002175501 N 0.000
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N 0.000
SCUD_0001034301 Schistosoma curassoni SCUD_0001034301 N 0.000
SMRZ_0000842001 Schistosoma margrebowiei SMRZ_0000842001 N 0.000
SMTD_0001017101 Schistosoma mattheei SMTD_0001017101 N 0.000
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N 0.000
SROB_0000153901 Schistosoma rodhaini SROB_0000153901 N 0.000
SROB_0000500401 Schistosoma rodhaini SROB_0000500401 N 0.000
SSLN_0000493501 Schistocephalus solidus SSLN_0000493501 N 0.000
SSLN_0001302101 Schistocephalus solidus SSLN_0001302101 N 0.000
T265_10726 Opisthorchis viverrini T265_10726 N 0.000
T265_12733 Opisthorchis viverrini T265_12733 N 0.000
TASK_0000795701 Taenia asiatica TASK_0000795701 N 0.000
TRE_0000506801 Trichobilharzia regenti TRE_0000506801 N 0.000
TRE_0000690301 Trichobilharzia regenti TRE_0000690301 N 0.000
TsM_000115400 Taenia solium TsM_000115400 N 0.000
TsM_000746700 Taenia solium TsM_000746700 N 0.000
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N 0.000
TTAC_0000939701 Hydatigera taeniaeformis TTAC_0000939701 N 0.000