OBART01G38810 (Oryza barthii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OBART01G38810 T124618_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP1
M06801_2.00 		Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY
RRGKDDYAHCTGGKGVAGG		 Dap-seq
OMalley et al.(2016)
STOP1_col_a 		0.803 0.929
STOP1
M06802_2.00 		Arabidopsis thaliana
RCCTNCMCCRGWWRN
NYWWCYGGKGNAGGY		 Dap-seq
OMalley et al.(2016)
STOP1_colamp_a 		0.803 0.929
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART01G38810.1 C2H2 ZF 369 391
OBART01G38810.1 C2H2 ZF 392 417

Links

Other C2H2 ZF family TFs
Other Oryza barthii TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BBA_07784 Beauveria bassiana BBA_07784 N
CFIO01_06299 Colletotrichum fioriniae CFIO01_06299 N
PV11_07069 Exophiala sideris PV11_07069 N
VHEMI02167 Torrubiella hemipterigena VHEMI02167 N