OLONG_016061 (Oryza longistaminata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OLONG_016061 T124852_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.786 0.844
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.786 0.822
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.785 0.800
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.769 0.667
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.765 0.667
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.764 0.644
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.764 0.644
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_016061-R1 C2H2 ZF 172 194
OLONG_016061-R1 C2H2 ZF 236 257

Links

Other C2H2 ZF family TFs
Other Oryza longistaminata TFs

166 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M378DRAFT_463994 Amanita muscaria M378DRAFT_463994 I 0.000
M378DRAFT_9324 Amanita muscaria M378DRAFT_9324 N 0.000
fgenesh3_kg.11__36__641_1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.11__36__641_1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.000
fgenesh1_pg.C_scaffold_4000174 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000174 N 0.000
SERLA73DRAFT_181394 Serpula lacrymans SERLA73DRAFT_181394 N 0.000
SCHCODRAFT_76401 Schizophyllum commune SCHCODRAFT_76401 N 0.000
PLICRDRAFT_45259 Plicaturopsis crispa PLICRDRAFT_45259 N 0.000
PLEOSDRAFT_174562 Pleurotus ostreatus PLEOSDRAFT_174562 N 0.000
PISMIDRAFT_112540 Pisolithus microcarpus PISMIDRAFT_112540 N 0.000
PILCRDRAFT_819471 Piloderma croceum PILCRDRAFT_819471 N 0.000
PILCRDRAFT_401124 Piloderma croceum PILCRDRAFT_401124 N 0.000
PHLGIDRAFT_125548 Phlebiopsis gigantea PHLGIDRAFT_125548 N 0.000
PAXRUDRAFT_822144 Paxillus rubicundulus PAXRUDRAFT_822144 N 0.000
Moror_12870 Moniliophthora roreri Moror_12870 N 0.000
M413DRAFT_29155 Hebeloma cylindrosporum M413DRAFT_29155 N 0.000
AGABI2DRAFT_191136 Agaricus bisporus AGABI2DRAFT_191136 N 0.000
LACBIDRAFT_296989 Laccaria bicolor LACBIDRAFT_296989 N 0.000
K443DRAFT_670658 Laccaria amethystina K443DRAFT_670658 N 0.000
JAAARDRAFT_47740 Jaapia argillacea JAAARDRAFT_47740 N 0.000
JAAARDRAFT_194246 Jaapia argillacea JAAARDRAFT_194246 N 0.000
HETIRDRAFT_439748 Heterobasidion irregulare HETIRDRAFT_439748 N 0.000
GLOTRDRAFT_78300 Gloeophyllum trabeum GLOTRDRAFT_78300 N 0.000
GALMADRAFT_244440 Galerina marginata GALMADRAFT_244440 N 0.000
FOMPIDRAFT_132799 Fomitopsis pinicola FOMPIDRAFT_132799 N 0.000
CY34DRAFT_12675 Suillus luteus CY34DRAFT_12675 N 0.000
CC1G_07059 Coprinopsis cinerea CC1G_07059 N 0.000
BN946_scf184939.g72 Trametes cinnabarina BN946_scf184939.g72 N 0.000