OLONG_020555 (Oryza longistaminata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OLONG_020555 T124858_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP1
M06801_2.00 		Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY
RRGKDDYAHCTGGKGVAGG		 Dap-seq
OMalley et al.(2016)
STOP1_col_a 		0.803 0.929
STOP1
M06802_2.00 		Arabidopsis thaliana
RCCTNCMCCRGWWRN
NYWWCYGGKGNAGGY		 Dap-seq
OMalley et al.(2016)
STOP1_colamp_a 		0.803 0.929
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_020555-R1 C2H2 ZF 387 409
OLONG_020555-R1 C2H2 ZF 410 435

Links

Other C2H2 ZF family TFs
Other Oryza longistaminata TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP10867 Atta cephalotes ACEP10867 I
BGIBMGA006120 Bombyx mori BGIBMGA006120 I
KLF10 Gasterosteus aculeatus ENSGACG00000004632 I
ENSONIG00000016428 Oreochromis niloticus ENSONIG00000016428 I
ENSXMAG00000002425 Xiphophorus maculatus ENSXMAG00000002425 I
GB45040 Apis mellifera GB45040 I
KGM_22205 Danaus plexippus KGM_22205 I
NV23733 Nasonia vitripennis NV23733 I
SINV19724 Solenopsis invicta SINV19724 I
TC014124 Tribolium castaneum TC014124 I
estExt_fgenesh2_pg.C_5760011 Branchiostoma floridae estExt_fgenesh2_pg.C_5760011 I
CLEC005479 Cimex lectularius CLEC005479 N
HHAL008603-PA Halyomorpha halys HHAL008603-PA N