ORGLA02G0229600 (Oryza glaberrima)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ORGLA02G0229600 T125078_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.776 0.804
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.776 0.804
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.775 0.783
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.759 0.652
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA02G0229600.1 C2H2 ZF 200 222
ORGLA02G0229600.1 C2H2 ZF 264 286

Links

Other C2H2 ZF family TFs
Other Oryza glaberrima TFs

151 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WUBG_13863 Wuchereria bancrofti WUBG_13863 N 0.000
Bm11274 Brugia malayi Bm11274 N 0.000
Bm2582 Brugia malayi Bm2582 N 0.000
LOAG_14115 Loa loa LOAG_14115 N 0.000
WBGene00244893 Onchocerca volvulus WBGene00244893 N 0.000
BTMF_0001630801 Brugia timori BTMF_0001630801 N 0.000
EEL_0000830101 Elaeophora elaphi EEL_0000830101 N 0.000
nDi.2.2.2.g11481 Dirofilaria immitis nDi.2.2.2.g11481 N 0.000
nLs.2.1.2.g07235 Litomosoides sigmodontis nLs.2.1.2.g07235 N 0.000
nOo.2.0.1.g08536 Onchocerca ochengi nOo.2.0.1.g08536 N 0.000
OFLC_0001102001 Onchocerca flexuosa OFLC_0001102001 N 0.000