CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PAXRUDRAFT_62501
(
Paxillus rubicundulus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PAXRUDRAFT_62501
T125486_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_110420
M01458_2.00
Schizophyllum commune
VCGCCACNNN
NNNGTGGCGB
PBM
Najafabadi et al.(2015a)
pTH10238
0.778
0.860
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIK99062
C2H2 ZF
3
25
FSCDLCALSFNRQHDLKRHRETH
KIK99062
C2H2 ZF
31
51
FLCNGGCGKTFTRKDALKRHQ
Links
Other
C2H2 ZF
family TFs
Other
Paxillus rubicundulus
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TPHA_0E02650
Tetrapisispora phaffii
TPHA_0E02650
N