CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PAXRUDRAFT_832768
(
Paxillus rubicundulus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PAXRUDRAFT_832768
T125499_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_269956
M01465_2.00
Schizophyllum commune
RCYCCACNN
NNGTGGRGY
PBM
Najafabadi et al.(2015a)
pTH11141
0.811
0.935
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIK81557
C2H2 ZF
5
27
HKCPVCQATFTRPQHVARHMRSH
KIK81557
C2H2 ZF
33
56
YKCQYCGDQFARSDLLSRHVNKCH
Links
Other
C2H2 ZF
family TFs
Other
Paxillus rubicundulus
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_164180
Schistosoma mansoni
Smp_164180
N
A_05286
Schistosoma haematobium
A_05286
N
csin109890
Clonorchis sinensis
csin109890
N
SCUD_0000871701
Schistosoma curassoni
SCUD_0000871701
N
SMTD_0001474901
Schistosoma mattheei
SMTD_0001474901
N
T265_05999
Opisthorchis viverrini
T265_05999
N
TRE_0000864201
Trichobilharzia regenti
TRE_0000864201
N