CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDE_03168
(
Penicillium oxalicum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PDE_03168
T125598_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
cre-1
M01198_2.00
Neurospora crassa
CCCCRNNN
NNNYGGGG
PBM
Lambert et al.(2019)
pTH8711
0.826
0.935
RO3G_16591
M01442_2.00
Rhizopus oryzae
NCCCCRCDNN
NNHGYGGGGN
PBM
Najafabadi et al.(2015a)
pTH10231
0.791
0.804
MIG1
M00026_2.00
Saccharomyces cerevisiae
HCCCCRCN
NGYGGGGD
PBM
Badis et al.(2008)
MIG1_2106
0.782
0.804
MIG1
M01532_2.00
Saccharomyces cerevisiae
NCYCCRBNNN
NNNVYGGRGN
PBM
Zhu et al.(2009)
Mig1
0.782
0.804
MIG1
M07456_2.00
Saccharomyces cerevisiae
NCCCCRS
SYGGGGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0337.1
0.782
0.804
MIG1
M08523_2.00
Saccharomyces cerevisiae
NCCCCRS
SYGGGGN
Misc
DeBoer et al.(2011)
YGL035C_555
0.782
0.804
MIG1
M08524_2.00
Saccharomyces cerevisiae
CCCCRSWWWW
WWWWSYGGGG
Misc
DeBoer et al.(2011)
YGL035C_654
0.782
0.804
MIG1
M10391_2.00
Saccharomyces cerevisiae
NHCCCCRSDTWWWWDDM
KHHWWWWAHSYGGGGDN
Transfac
Matys et al.(2006)
F$MIG1_01
0.782
0.804
MIG1
M10392_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MIG1_03
0.782
0.804
MIG1
M10393_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MIG1_Q6
0.782
0.804
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPS28222
C2H2 ZF
69
91
YKCPLCDRAFHRLEHQTRHIRTH
EPS28222
C2H2 ZF
97
121
HACQFPGCTKRFSRSDELTRHSRIH
Links
Other
C2H2 ZF
family TFs
Other
Penicillium oxalicum
TFs
285 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MCYG_06232
Microsporum canis
MCYG_06232
N
ARB_00470
Arthroderma benhamiae
ARB_00470
N
EURHEDRAFT_406252
Aspergillus ruber
EURHEDRAFT_406252
N
H101_05082
Trichophyton interdigitale
H101_05082
N
H102_00291
Trichophyton rubrum
H102_00291
N
H105_00285
Trichophyton soudanense
H105_00285
N
MCYG_06232
Arthroderma otae
MCYG_06232
N
MGYG_06660
Microsporum gypseum
MGYG_06660
N
TEQG_05420
Trichophyton equinum
TEQG_05420
N
TESG_07757
Trichophyton tonsurans
TESG_07757
N