PTT_20225 (Pyrenophora teres)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PTT_20225 T127289_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU03975
M01879_2.00 		Neurospora crassa
NNRCWYDDNN
NNHHRWGYNN		 PBM
Weirauch et al.(2014)
pTH9677 		0.812 0.946
HCBG_04116
M01448_2.00 		Histoplasma capsulatum
RHCHGWGCDB
VHGCWCDGDY		 PBM
Najafabadi et al.(2015a)
pTH11149 		0.807 0.946
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFQ84982 C2H2 ZF 146 168
EFQ84982 C2H2 ZF 174 198
EFQ84982 C2H2 ZF 204 226
EFQ84982 C2H2 ZF 232 256

Links

Other C2H2 ZF family TFs
Other Pyrenophora teres TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA003303 Oryza indica BGIOSGA003303 N 0.000
LPERR01G11040 Leersia perrieri LPERR01G11040 N 0.000
OB01G21760 Oryza brachyantha OB01G21760 N 0.000
OBART01G12040 Oryza barthii OBART01G12040 N 0.000
OGLUM01G13480 Oryza glumaepatula OGLUM01G13480 N 0.000
ONIVA01G14270 Oryza nivara ONIVA01G14270 N 0.000
ORGLA01G0101600 Oryza glaberrima ORGLA01G0101600 N 0.000
ORUFI01G13010 Oryza rufipogon ORUFI01G13010 N 0.000