CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SEPMUDRAFT_146618
(
Sphaerulina musiva
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
SEPMUDRAFT_146618
T128526_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06487
M01197_2.00
Neurospora crassa
NBMGCCKCNN
NNGMGGCKVN
PBM
Lambert et al.(2019)
pTH10205
0.773
0.826
NCU06487
M01887_2.00
Neurospora crassa
NBAGCCKCRH
DYGMGGCTVN
PBM
Weirauch et al.(2014)
pTH8951
0.773
0.826
XP_001540939.1
M01188_2.00
Histoplasma capsulatum
NBAGCCKCNN
NNGMGGCTVN
PBM
Lambert et al.(2019)
pTH11147
0.757
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMF17655
C2H2 ZF
336
361
FRCDYPGCTAPPFQTQYLLSSHRNVH
EMF17655
C2H2 ZF
367
396
HYCPVKECPRSEGGKGFKRKNEMIRHGLVH
EMF17655
C2H2 ZF
401
427
YICPFCPDREHRYPRPDNLQRHVRVHH
Links
Other
C2H2 ZF
family TFs
Other
Sphaerulina musiva
TFs
83 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O7_04175
Cladophialophora yegresii
A1O7_04175
N
PV07_06220
Cladophialophora immunda
PV07_06220
N
PV10_09026
Exophiala mesophila
PV10_09026
N