CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SINV24839
(
Solenopsis invicta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
SINV24839
T128912_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ab
M06173_2.00
Drosophila melanogaster
BBYHDVWNDRKWCCTGGYBDV
BHVRCCAGGWMYHNWBHDRVV
B1H
Zhu et al.(2011)
ab_SANGER_10_FBgn0259750
0.827
0.978
ab
M06174_2.00
Drosophila melanogaster
NVNNHVRCCAGGWMCYNHNNNNVNNN
NNNBNNNNDNRGKWCCTGGYBDNNBN
B1H
Zhu et al.(2011)
ab_SOLEXA_5_FBgn0259750
0.827
0.978
ab
M06175_2.00
Drosophila melanogaster
YACTTCCB
VGGAAGTR
B1H
Zhu et al.(2011)
CG32830_SANGER_10_FBgn0052830
0.827
0.978
ab
M06176_2.00
Drosophila melanogaster
NNNNVNNNNHSATTAAHNNVNNNN
NNNNBNNDTTAATSDNNNNBNNNN
B1H
Zhu et al.(2011)
CG32830_SOLEXA_5_FBgn0052830
0.827
0.978
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SINV24839-PA
C2H2 ZF
16
38
PCPKCGKMYRSAHTLRTHLEDKH
SINV24839-PA
C2H2 ZF
44
67
YRCVLCGTVAKSRNSLHSHMSRQH
Links
Other
C2H2 ZF
family TFs
Other
Solenopsis invicta
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_05780
Aegilops tauschii
F775_05780
N
Traes_2AS_C4568AE60
Triticum aestivum
Traes_2AS_C4568AE60
N
Traes_2DS_1FE8E9DE9
Triticum aestivum
Traes_2DS_1FE8E9DE9
N