SINV24839 (Solenopsis invicta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SINV24839 T128912_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ab
M06173_2.00
Drosophila melanogaster
BBYHDVWNDRKWCCTGGYBDV

BHVRCCAGGWMYHNWBHDRVV
B1H
Zhu et al.(2011)
ab_SANGER_10_FBgn0259750
0.827 0.978
ab
M06174_2.00
Drosophila melanogaster
NVNNHVRCCAGGWMCYNHNNNNVNNN

NNNBNNNNDNRGKWCCTGGYBDNNBN
B1H
Zhu et al.(2011)
ab_SOLEXA_5_FBgn0259750
0.827 0.978
ab
M06175_2.00
Drosophila melanogaster
YACTTCCB

VGGAAGTR
B1H
Zhu et al.(2011)
CG32830_SANGER_10_FBgn0052830
0.827 0.978
ab
M06176_2.00
Drosophila melanogaster
NNNNVNNNNHSATTAAHNNVNNNN

NNNNBNNDTTAATSDNNNNBNNNN
B1H
Zhu et al.(2011)
CG32830_SOLEXA_5_FBgn0052830
0.827 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SINV24839-PA C2H2 ZF 16 38
SINV24839-PA C2H2 ZF 44 67

Links

Other C2H2 ZF family TFs
Other Solenopsis invicta TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_05780 Aegilops tauschii F775_05780 N
Traes_2AS_C4568AE60 Triticum aestivum Traes_2AS_C4568AE60 N
Traes_2DS_1FE8E9DE9 Triticum aestivum Traes_2DS_1FE8E9DE9 N