SINV25327 (Solenopsis invicta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SINV25327 T128921_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Glis2
M00129_2.00 		Mus musculus
NKACCCCYYNN
NNRRGGGGTMN		 PBM
Badis et al.(2009)
Glis2_1757 		0.778 0.855
GLIS2
M02887_2.00 		Homo sapiens
KACCCCCCRCRDHG
CDHYGYGGGGGGTM		 SELEX
Jolma et al.(2013)
GLIS2_1 		0.778 0.855
GLIS2
M04449_2.00 		Homo sapiens
RCCCCCCRCRWHGH
DCDWYGYGGGGGGY		 SELEX
Yin et al.(2017)
GLIS2_eDBD_HT-SELEX 		0.778 0.855
GLIS2
M04450_2.00 		Homo sapiens
DCWHYGYDGGGGGT
ACCCCCHRCRDWGH		 SELEX
Yin et al.(2017)
GLIS2_eDBD_Methyl-HT-SELEX 		0.778 0.855
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SINV25327-PA C2H2 ZF 65 87
SINV25327-PA C2H2 ZF 93 117
SINV25327-PA C2H2 ZF 123 149

Links

Other C2H2 ZF family TFs
Other Solenopsis invicta TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA028396 Oryza indica BGIOSGA028396 N
LPERR08G08160 Leersia perrieri LPERR08G08160 N
OBART08G09450 Oryza barthii OBART08G09450 N
OGLUM08G10180 Oryza glumaepatula OGLUM08G10180 N
OLONG_002957 Oryza longistaminata OLONG_002957 N
OMERI08G08060 Oryza meridionalis OMERI08G08060 N
OPUNC08G08700 Oryza punctata OPUNC08G08700 N
ORGLA08G0080600 Oryza glaberrima ORGLA08G0080600 N
ORUFI08G10670 Oryza rufipogon ORUFI08G10670 N
OS08G0292000 Oryza sativa OS08G0292000 N