SMAC_06146 (Sordaria macrospora)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SMAC_06146 T128996_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU03975
M01879_2.00 		Neurospora crassa
NNRCWYDDNN
NNHHRWGYNN		 PBM
Weirauch et al.(2014)
pTH9677 		0.827 1.000
HCBG_04116
M01448_2.00 		Histoplasma capsulatum
RHCHGWGCDB
VHGCWCDGDY		 PBM
Najafabadi et al.(2015a)
pTH11149 		0.798 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCC13003 C2H2 ZF 221 243
CCC13003 C2H2 ZF 249 273
CCC13003 C2H2 ZF 279 301
CCC13003 C2H2 ZF 307 331

Links

Other C2H2 ZF family TFs
Other Sordaria macrospora TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
atf-8 Caenorhabditis elegans WBGene00017535 D 0.000
WUBG_00008 Wuchereria bancrofti WUBG_00008 I 0.000
CBN01920 Caenorhabditis brenneri CBN01920 I 0.000
CBN02465 Caenorhabditis brenneri CBN02465 I 0.000
CJA08004 Caenorhabditis japonica CJA08004 I 0.000
CRE30851 Caenorhabditis remanei CRE30851 I 0.000
nLs.2.1.2.g05495 Litomosoides sigmodontis nLs.2.1.2.g05495 I 0.000
TCNE_0000328801 Toxocara canis TCNE_0000328801 I 0.000