Solyc03g115450.1 (Solanum lycopersicum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Solyc03g115450.1 T129356_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.822 0.848
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.797 0.804
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.797 0.783
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.776 0.717
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc03g115450.1.1 C2H2 ZF 290 312
Solyc03g115450.1.1 C2H2 ZF 354 376

Links

Other C2H2 ZF family TFs
Other Solanum lycopersicum TFs

303 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CPUR_05540 Claviceps purpurea CPUR_05540 N
MAC_07184 Metarhizium acridum MAC_07184 N
MAM_02519 Metarhizium album MAM_02519 N
MANI_013965 Metarhizium anisopliae MANI_013965 N
MBR_00863 Metarhizium brunneum MBR_00863 N
MGU_06368 Metarhizium guizhouense MGU_06368 N
X797_007224 Metarhizium robertsii X797_007224 N