TC004673 (Tribolium castaneum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 TC004673 T129984_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
erm
M03686_2.00 		Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA		 SELEX
Nitta et al.(2015)
CG31670_1 		0.800 0.920
erm
M06128_2.00 		Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM		 B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375 		0.800 0.920
erm
M06129_2.00 		Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV		 B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375 		0.800 0.920
FEZF1
M08307_2.00 		Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN		 ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE 		0.790 0.884
FEZF1
M08889_2.00 		Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH		 Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C 		0.790 0.884
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TC004673-PA C2H2 ZF 136 158
TC004673-PA C2H2 ZF 164 186
TC004673-PA C2H2 ZF 192 214
TC004673-PA C2H2 ZF 220 242
TC004673-PA C2H2 ZF 248 270
TC004673-PA C2H2 ZF 276 299

Links

Other C2H2 ZF family TFs
Other Tribolium castaneum TFs

177 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRE2 Arabidopsis thaliana AT5G15160 N 0.000
Bo00958s010 Brassica oleracea Bo00958s010 N 0.000
Bra006286 Brassica rapa Bra006286 N 0.000
Bra008716 Brassica rapa Bra008716 N 0.000
BNQ2 Arabidopsis lyrata scaffold_601543.1 N 0.000
Bostr.2902s0250 Boechera stricta Bostr.2902s0250 N 0.000
Cagra.1036s0041 Capsella grandiflora Cagra.1036s0041 N 0.000
Carubv10002337m.g Capsella rubella Carubv10002337m.g N 0.000
Thhalv10015131m.g Eutrema salsugineum Thhalv10015131m.g N 0.000