TCM_007214 (Theobroma cacao)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 TCM_007214 T130171_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.822 0.935
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.803 0.891
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.799 0.717
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.799 0.696
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.796 0.826
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.796 0.826
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.796 0.826
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.787 0.783
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.787 0.783
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.776 0.696
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOX98456 C2H2 ZF 93 115
EOX98456 C2H2 ZF 148 170

Links

Other C2H2 ZF family TFs
Other Theobroma cacao TFs

230 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
dmd-3 Caenorhabditis elegans WBGene00012832 D 0.000
L892_g27879 Steinernema scapterisci L892_g27879 I 0.000
HPLM_0001382501 Haemonchus placei HPLM_0001382501 N 0.000
TCNE_0001625401 Toxocara canis TCNE_0001625401 N 0.000
TCLT_0000242201 Thelazia callipaeda TCLT_0000242201 N 0.000
SSTP_0000839900 Strongyloides stercoralis SSTP_0000839900 N 0.000
SSTP_0000731600 Strongyloides stercoralis SSTP_0000731600 N 0.000
SPAL_0001355700 Strongyloides papillosus SPAL_0001355700 N 0.000
SMUV_0001103601 Syphacia muris SMUV_0001103601 N 0.000
SMUV_0000467601 Syphacia muris SMUV_0000467601 N 0.000
RSKR_0000247700 Rhabditophanes kr3021 RSKR_0000247700 N 0.000
PTRK_0001116100 Parastrongyloides trichosuri PTRK_0001116100 N 0.000
NBR_0000071001 Nippostrongylus brasiliensis NBR_0000071001 N 0.000
L889_g14208 Steinernema feltiae L889_g14208 N 0.000
Bm6550 Brugia malayi Bm6550 N 0.000
Hba_18486 Heterorhabditis bacteriophora Hba_18486 N 0.000
EVEC_0001283901 Enterobius vermicularis EVEC_0001283901 N 0.000
EEL_0000847601 Elaeophora elaphi EEL_0000847601 N 0.000
DME_0000028701 Dracunculus medinensis DME_0000028701 N 0.000
ASU_15182 Ascaris suum ASU_15182 N 0.000
ANCCEY_01474 Ancylostoma ceylanicum ANCCEY_01474 N 0.000
ALUE_0001885601 Ascaris lumbricoides ALUE_0001885601 N 0.000
WBGene00242840 Onchocerca volvulus WBGene00242840 N 0.000
LOAG_13296 Loa loa LOAG_13296 N 0.000
CRE06043 Caenorhabditis remanei CRE06043 N 0.000
CBN07630 Caenorhabditis brenneri CBN07630 N 0.000