Traes_5DL_4E890ABF3 (Triticum aestivum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Traes_5DL_4E890ABF3 T130620_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.760 0.696
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.760 0.696
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.759 0.696
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.759 0.674
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_5DL_4E890ABF3.1 C2H2 ZF 59 86
Traes_5DL_4E890ABF3.1 C2H2 ZF 110 132

Links

Other C2H2 ZF family TFs
Other Triticum aestivum TFs

322 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
THI2 Saccharomyces cerevisiae YBR240C D 0.000
SKUD_138702 Saccharomyces kudriavzevii SKUD_138702 I 0.000
SAKL0A06072g Lachancea kluyveri SAKL0A06072g I 0.000
KLTH0H05720g Kluyveromyces thermotolerans KLTH0H05720g I 0.000
4848_YBR240C Saccharomyces mikatae 4848_YBR240C I 0.000
2117_YBR240C Saccharomyces bayanus 2117_YBR240C I 0.000
1967_YBR240C Saccharomyces paradoxus 1967_YBR240C I 0.000
Scas_Contig597.4 Saccharomyces castellii Scas_Contig597.4 I 0.000
ZYRO0G21626g Zygosaccharomyces rouxii ZYRO0G21626g I 0.000
ZBAI_07794 Zygosaccharomyces bailii ZBAI_07794 I 0.000
ZBAI_04285 Zygosaccharomyces bailii ZBAI_04285 I 0.000
TDEL_0B04000 Torulaspora delbrueckii TDEL_0B04000 I 0.000
SU7_0277 Saccharomyces arboricola SU7_0277 I 0.000
AACERI_AaceriAFL033W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFL033W I 0.000
NDAI_0F02050 Naumovozyma dairenensis NDAI_0F02050 I 0.000
NCAS_0H01240 Naumovozyma castellii NCAS_0H01240 I 0.000
LALA0_S13e03268g Lachancea lanzarotensis LALA0_S13e03268g I 0.000
Kpol_534p28 Vanderwaltozyma polyspora Kpol_534p28 I 0.000
KLTH0H05720g Lachancea thermotolerans KLTH0H05720g I 0.000
KLLA0_F10373g Kluyveromyces lactis KLLA0_F10373g I 0.000
KAFR_0G03520 Kazachstania africana KAFR_0G03520 I 0.000
HMPREF1120_05596 Exophiala dermatitidis HMPREF1120_05596 I 0.000
Ecym_2263 Eremothecium cymbalariae Ecym_2263 I 0.000
AGOS_AFL033W Ashbya gossypii AGOS_AFL033W I 0.000
PV06_07668 Exophiala oligosperma PV06_07668 N 0.000
NechaG86758 Fusarium solani NechaG86758 N 0.000
fgenesh1_pg.sca_32_chr11_3_0000153 Nectria haematococca fgenesh1_pg.sca_32_chr11_3_0000153 N 0.000