CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRV_03506
(
Trichophyton verrucosum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
TRV_03506
T130884_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03184
M01474_2.00
Neurospora crassa
NDNNVATCNN
NNGATBNNHN
PBM
Najafabadi et al.(2015a)
pTH10252
0.798
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFE41761
C2H2 ZF
251
273
YICRTCNKAFSRPSSLRIHSHSH
EFE41761
C2H2 ZF
279
304
FRCPRPGCGKAFSVRSNMKRHERGCH
Links
Other
C2H2 ZF
family TFs
Other
Trichophyton verrucosum
TFs
121 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MAC_06004
Metarhizium acridum
MAC_06004
N
0.000
PMAA_001430
Penicillium marneffei
PMAA_001430
N
0.000
gw1.00083.300.1
Aspergillus carbonarius
gw1.00083.300.1
N
0.000
e_gw1.00815.93.1
Aspergillus carbonarius
e_gw1.00815.93.1
N
0.000
fgenesh1_pg.sca_11_chr8_3_0000196
Nectria haematococca
fgenesh1_pg.sca_11_chr8_3_0000196
N
0.000
estExt_fgenesh1_pg.C_240014
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_240014
N
0.000
Z517_00801
Fonsecaea pedrosoi
Z517_00801
N
0.000
SBOR_5781
Sclerotinia borealis
SBOR_5781
N
0.000
PVAR5_1141
Byssochlamys spectabilis
PVAR5_1141
N
0.000
PMAA_001430
Talaromyces marneffei
PMAA_001430
N
0.000
OIDMADRAFT_97438
Oidiodendron maius
OIDMADRAFT_97438
N
0.000
OIDMADRAFT_193465
Oidiodendron maius
OIDMADRAFT_193465
N
0.000
NechaG84128
Fusarium solani
NechaG84128
N
0.000
MGG_07361
Magnaporthe oryzae
MGG_07361
N
0.000
MBR_08937
Metarhizium brunneum
MBR_08937
N
0.000
MANI_026073
Metarhizium anisopliae
MANI_026073
N
0.000
A1O9_00991
Exophiala aquamarina
A1O9_00991
N
0.000
LEMA_P104170.1
Leptosphaeria maculans
LEMA_P104170.1
N
0.000
HMPREF1120_04133
Exophiala dermatitidis
HMPREF1120_04133
N
0.000
F503_02724
Ophiostoma piceae uamh
F503_02724
N
0.000
COCC4DRAFT_64454
Bipolaris maydis
COCC4DRAFT_64454
N
0.000
Cob_05129
Colletotrichum orbiculare
Cob_05129
N
0.000
CH063_13215
Colletotrichum higginsianum
CH063_13215
N
0.000
CH063_00115
Colletotrichum higginsianum
CH063_00115
N
0.000
CGGC5_11092
Colletotrichum gloeosporioides
CGGC5_11092
N
0.000
CFIO01_05805
Colletotrichum fioriniae
CFIO01_05805
N
0.000
CADAORAG00005662
Aspergillus oryzae
CADAORAG00005662
N
0.000
CADANGAG00006610
Aspergillus niger
CADANGAG00006610
N
0.000
BBA_08510
Beauveria bassiana
BBA_08510
N
0.000
A1O9_12743
Exophiala aquamarina
A1O9_12743
N
0.000
A1O9_07021
Exophiala aquamarina
A1O9_07021
N
0.000