VDBG_09365 (Verticillium alfalfae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 VDBG_09365 T131386_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FGRRES_01877
M01175_2.00 		Fusarium graminearum
NNNRGCTGNN
NNCAGCYNNN		 PBM
Lambert et al.(2019)
pTH10260 		0.825 0.976
NCU03699
M01878_2.00 		Neurospora crassa
NNVRGCTGDN
NHCAGCYBNN		 PBM
Weirauch et al.(2014)
pTH8956 		0.824 0.976
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEY23255 C2H2 ZF 248 269
EEY23255 C2H2 ZF 276 302
EEY23255 C2H2 ZF 307 337
EEY23255 C2H2 ZF 369 388

Links

Other C2H2 ZF family TFs
Other Verticillium alfalfae TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BDDG_02000 Blastomyces dermatitidis BDDG_02000 I
HCBG_00538 Histoplasma capsulatum HCBG_00538 I
PAAG_05745 Paracoccidioides sp lutzii PAAG_05745 I
A1O9_01187 Exophiala aquamarina A1O9_01187 N
THITE_2141915 Thielavia terrestris THITE_2141915 N