sem-4 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00004773 T131572_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Involved in several processes, including mesodermal cell differentiation; neuroblast differentiation; and transdifferentiation. Located in nucleus. Is expressed in several structures, including M lineage cell; nervous system; rectal epithelial cell; rectum; and tail hypodermis. Human ortholog(s) of this gene implicated in several diseases, including Duane retraction syndrome; Duane-radial ray syndrome; Holt-Oram syndrome; IVIC syndrome; and Townes-Brocks syndrome. Orthologous to several human genes including SALL1 (spalt like transcription factor 1) and SALL3 (spalt like transcription factor 3). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
F15C11.1 C2H2 ZF 589 611
F15C11.1 C2H2 ZF 617 639

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

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9 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action