Aan_R013387 (Calypte anna)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Aan_R013387 T132663_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL6
M00228_2.00 		Homo sapiens
NNVNDVRANN
NNTYBHNBNN		 PBM
Barrera et al.(2016)
BCL6_REF 		0.827 0.993
BCL6
M04424_2.00 		Homo sapiens
NYGCTTTCKAGGAAHN
NDTTCCTMGAAAGCRN		 SELEX
Yin et al.(2017)
BCL6_eDBD_HT-SELEX_1 		0.827 0.993
BCL6
M04425_2.00 		Homo sapiens
NDTTCCTMGAWWRCVN
NBGYWWTCKAGGAAHN		 SELEX
Yin et al.(2017)
BCL6_eDBD_HT-SELEX_2 		0.827 0.993
Bcl6
M08097_2.00 		Mus musculus
NDCYYTCYAGGAAN
NTTCCTRGARRGHN		 ChIP-seq
Mathelier et al.(2014)
MA0463.1 		0.827 0.993
Bcl6
M08024_2.00 		Mus musculus
HYNBHHWBWSHTCHYNYYYYYYNBYYHYYH
DRRDRRVNRRRRRRNRDGADSWVWDDVNRD		 ChIP-seq
Chen et al.(2011)
SRP001843_Bcl6_IgG_LPSstim 		0.827 0.993
BCL6
M08877_2.00 		Homo sapiens
NNMYYTCYAGGAA
TTCCTRGARRKNN		 Misc
Kulakovskiy et al.(2013)
BCL6_HUMAN.H11MO.0.A 		0.827 0.993
Bcl6
M08972_2.00 		Mus musculus
NNMTYTCYAGGAA
TTCCTRGARAKNN		 Misc
Kulakovskiy et al.(2013)
BCL6_MOUSE.H11MO.0.A 		0.827 0.993
Bcl6
M09513_2.00 		Mus musculus
NNNNYTTCYWGGAAN
NTTCCWRGAARNNNN		 Misc
Heinz et al.(2010)
Liver-Bcl6_GSE31578 		0.827 0.993
BCL6
M10180_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_01 		0.827 0.993
BCL6
M10181_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_02 		0.827 0.993
BCL6
M10182_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q3_01 		0.827 0.993
BCL6
M10183_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q3 		0.827 0.993
BCL6
M10184_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q6 		0.827 0.993
BCL6
M04426_2.00 		Homo sapiens
NTGCTTTCTAGGAAHN
NDTTCCTAGAAAGCAN		 SELEX
Yin et al.(2017)
BCL6_eDBD_Methyl-HT-SELEX_1 		0.827 0.993
BCL6
M04427_2.00 		Homo sapiens
NDTTCCTMGAWWRCVN
NBGYWWTCKAGGAAHN		 SELEX
Yin et al.(2017)
BCL6_eDBD_Methyl-HT-SELEX_2 		0.827 0.993
BCL6
M00227_2.00 		Homo sapiens
NTAATTRWNN
NNWYAATTAN		 PBM
Barrera et al.(2016)
BCL6_H676Y 		0.821 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aan_R013387 C2H2 ZF 521 544
Aan_R013387 C2H2 ZF 549 571
Aan_R013387 C2H2 ZF 577 599
Aan_R013387 C2H2 ZF 605 627
Aan_R013387 C2H2 ZF 633 655
Aan_R013387 C2H2 ZF 661 684

Links

Other C2H2 ZF family TFs
Other Calypte anna TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
dmd-3 Caenorhabditis elegans WBGene00012832 D
L892_g27879 Steinernema scapterisci L892_g27879 I
EVEC_0001283901 Enterobius vermicularis EVEC_0001283901 N
TCLT_0000242201 Thelazia callipaeda TCLT_0000242201 N
SPAL_0001355700 Strongyloides papillosus SPAL_0001355700 N
SMUV_0001103601 Syphacia muris SMUV_0001103601 N
SMUV_0000467601 Syphacia muris SMUV_0000467601 N
RSKR_0000247700 Rhabditophanes kr3021 RSKR_0000247700 N
PTRK_0001116100 Parastrongyloides trichosuri PTRK_0001116100 N
NBR_0000071001 Nippostrongylus brasiliensis NBR_0000071001 N
L889_g14208 Steinernema feltiae L889_g14208 N
HPLM_0001382501 Haemonchus placei HPLM_0001382501 N
Hba_18486 Heterorhabditis bacteriophora Hba_18486 N
Bm6550 Brugia malayi Bm6550 N
EEL_0000847601 Elaeophora elaphi EEL_0000847601 N
DME_0000028701 Dracunculus medinensis DME_0000028701 N
ASU_15182 Ascaris suum ASU_15182 N
ANCCEY_01474 Ancylostoma ceylanicum ANCCEY_01474 N
ALUE_0001885601 Ascaris lumbricoides ALUE_0001885601 N
WBGene00242840 Onchocerca volvulus WBGene00242840 N
LOAG_13296 Loa loa LOAG_13296 N
CRE06043 Caenorhabditis remanei CRE06043 N
CBN07630 Caenorhabditis brenneri CBN07630 N
CBG05690 Caenorhabditis briggsae CBG05690 N