Alligator_sinensis_CCG003716.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG003716.1 T133038_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG003716.1 C2H2 ZF 420 442
Alligator_sinensis_CCG003716.1 C2H2 ZF 448 470
Alligator_sinensis_CCG003716.1 C2H2 ZF 476 497
Alligator_sinensis_CCG003716.1 C2H2 ZF 504 526
Alligator_sinensis_CCG003716.1 C2H2 ZF 532 554
Alligator_sinensis_CCG003716.1 C2H2 ZF 560 582
Alligator_sinensis_CCG003716.1 C2H2 ZF 590 610
Alligator_sinensis_CCG003716.1 C2H2 ZF 616 638
Alligator_sinensis_CCG003716.1 C2H2 ZF 644 666
Alligator_sinensis_CCG003716.1 C2H2 ZF 672 694
Alligator_sinensis_CCG003716.1 C2H2 ZF 701 722

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TGA4 Arabidopsis thaliana AT5G10030 D
TGA1 Arabidopsis thaliana AT5G65210 D
Thhalv10013890m.g Eutrema salsugineum Thhalv10013890m.g I
TGA1 Arabidopsis lyrata Al_scaffold_0008_3070 I
Thhalv10004438m.g Eutrema salsugineum Thhalv10004438m.g I
Carubv10026623m.g Capsella rubella Carubv10026623m.g I
Carubv10001361m.g Capsella rubella Carubv10001361m.g I
Cagra.1085s0054 Capsella grandiflora Cagra.1085s0054 I
Cagra.0917s0063 Capsella grandiflora Cagra.0917s0063 I
Bostr.13175s0098 Boechera stricta Bostr.13175s0098 I
Bostr.0568s0268 Boechera stricta Bostr.0568s0268 I
TGA4 Arabidopsis lyrata fgenesh2_kg.6__963__AT5G10030.1 I
Bra037809 Brassica rapa Bra037809 I
Bra037374 Brassica rapa Bra037374 I
Bra031871 Brassica rapa Bra031871 I
Bra024366 Brassica rapa Bra024366 I
Bo9g018570 Brassica oleracea Bo9g018570 I
Bo3g099410 Brassica oleracea Bo3g099410 I