CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Alligator_sinensis_CCG012135.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG012135.1
T133290_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG012135.1
C2H2 ZF
351
376
HCCRWIDCSALYEQQEELVRHIEKIH
Alligator_sinensis_CCG012135.1
C2H2 ZF
385
412
FTCFWAGCPRRYKPFNARYKLLIHMRVH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000015793
Astyanax mexicanus
ENSAMXG00000015793
I
0.000
Tal_R006175
Tyto alba
Tal_R006175
I
0.000
Pvit_15884
Pogona vitticeps
Pvit_15884
I
0.000
ENSOARG00000020232
Ovis aries
ENSOARG00000020232
I
0.000
Cmyd_10008461
Chelonia mydas
Cmyd_10008461
I
0.000
Brh_R007745
Buceros rhinoceros
Brh_R007745
I
0.000
Afo_R010549
Aptenodytes forsteri
Afo_R010549
I
0.000
ENSMMUG00000006501
Macaca mulatta
ENSMMUG00000006501
I
0.000
Aan_R010750
Calypte anna
Aan_R010750
I
0.000
Alligator_sinensis_CCG014201.1
Alligator sinensis
Alligator_sinensis_CCG014201.1
N
0.000
MYRFL
Otolemur garnettii
ENSOGAG00000028145
N
0.000
ENSPANG00000002677
Papio anubis
ENSPANG00000002677
N
0.000
Myrfl
Rattus norvegicus
ENSRNOG00000021833
N
0.000
ENSSTOG00000020113
Ictidomys tridecemlineatus
ENSSTOG00000020113
N
0.000
ENSTGUG00000007004
Taeniopygia guttata
ENSTGUG00000007004
N
0.000
Aan_R014790
Calypte anna
Aan_R014790
N
0.000
Afo_R009725
Aptenodytes forsteri
Afo_R009725
N
0.000
Tal_R011346
Tyto alba
Tal_R011346
N
0.000
ENSBTAP00000019581-D1
Bos grunniens
ENSBTAP00000019581-D1
N
0.000
ENSMMUP00000039187
Macaca fascicularis
ENSMMUP00000039187
N
0.000
Gfo_R003999
Geospiza fortis
Gfo_R003999
N
0.000
Myotis_brandtii_MRF_10004739
Myotis brandtii
Myotis_brandtii_MRF_10004739
N
0.000
MYRFL
Anolis carolinensis
ENSACAG00000004738
N
0.000
MYRFL
Gallus gallus
ENSGALG00000019352
N
0.000
ENSAMEG00000011926
Ailuropoda melanoleuca
ENSAMEG00000011926
N
0.000
ENSAPLG00000012837
Anas platyrhynchos
ENSAPLG00000012837
N
0.000
MYRFL
Bos taurus
ENSBTAG00000014829
N
0.000
ENSCJAG00000036263
Callithrix jacchus
ENSCJAG00000036263
N
0.000
MYRFL
Cavia porcellus
ENSCPOG00000013850
N
0.000
MYRFL
Dasypus novemcinctus
ENSDNOG00000044488
N
0.000
ENSFALG00000010237
Ficedula albicollis
ENSFALG00000010237
N
0.000
MYRFL
Felis catus
ENSFCAG00000031998
N
0.000
MYRFL
Homo sapiens
ENSG00000166268
N
0.000
MYRFL
Oryctolagus cuniculus
ENSOCUG00000002982
N
0.000
MYRFL
Loxodonta africana
ENSLAFG00000001286
N
0.000
ENSLOCG00000016212
Lepisosteus oculatus
ENSLOCG00000016212
N
0.000
MYRFL
Meleagris gallopavo
ENSMGAG00000010606
N
0.000
MYRFL
Myotis lucifugus
ENSMLUG00000009508
N
0.000
MYRFL
Monodelphis domestica
ENSMODG00000020385
N
0.000
ENSMPUG00000017495
Mustela putorius furo
ENSMPUG00000017495
N
0.000
Myrfl
Mus musculus
ENSMUSG00000034057
N
0.000
MYRFL
Ornithorhynchus anatinus
ENSOANG00000005958
N
0.000