Alligator_sinensis_CCG013964.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG013964.1 T133310_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG013964.1 C2H2 ZF 495 517
Alligator_sinensis_CCG013964.1 C2H2 ZF 523 545
Alligator_sinensis_CCG013964.1 C2H2 ZF 551 573
Alligator_sinensis_CCG013964.1 C2H2 ZF 578 600

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSOPRG00000017040 Ochotona princeps ENSOPRG00000017040 I 0.787
ZBTB45 Sorex araneus ENSSARG00000001558 I 0.785
ENSACAG00000010650 Anolis carolinensis ENSACAG00000010650 N 0.822
ENSAMXG00000013012 Astyanax mexicanus ENSAMXG00000013012 N 0.763
ENSLACG00000008725 Latimeria chalumnae ENSLACG00000008725 N 0.804
ENSPFOG00000014275 Poecilia formosa ENSPFOG00000014275 N 0.760
ENSPSIG00000013341 Pelodiscus sinensis ENSPSIG00000013341 N 0.804
ENSSHAG00000004332 Sarcophilus harrisii ENSSHAG00000004332 N 0.782
ZBTB45 Tetraodon nigroviridis ENSTNIG00000003273 N 0.756
ENSTRUG00000010240 Takifugu rubripes ENSTRUG00000010240 N 0.773
ENSXMAG00000014452 Xiphophorus maculatus ENSXMAG00000014452 N 0.760
Cmyd_10003616 Chelonia mydas Cmyd_10003616 N 0.827
Ogr03674 Ophisaurus gracilis Ogr03674 N 0.822
Pvit_03126 Pogona vitticeps Pvit_03126 N 0.822
zbtb45.L Xenopus laevis XB-GENE-17330664 N 0.812
zbtb45.S Xenopus laevis XB-GENE-5817023 N 0.812