Cla018945 (Citrullus lanatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cla018945 T133967_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SGR5
M06805_2.00 		Arabidopsis thaliana
WTTTTGTCTTWTHYD
HRDAWAAGACAAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_col_a 		0.811 0.976
SGR5
M06806_2.00 		Arabidopsis thaliana
WTTTGTCTYWWHBNN
NNVDWWRAGACAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_colamp_a 		0.811 0.976
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla018945 C2H2 ZF 138 159
Cla018945 C2H2 ZF 159 184

Links

Other C2H2 ZF family TFs
Other Citrullus lanatus TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF770 Homo sapiens ENSG00000198146 D 0.000
Zfp770 Mus musculus ENSMUSG00000040321 I 0.000
Myotis_brandtii_ZNF770_10022190 Myotis brandtii Myotis_brandtii_ZNF770_10022190 I 0.000
ENSP00000348673 Macaca fascicularis ENSP00000348673 I 0.000
ENSP00000348673-D1 Bos grunniens ENSP00000348673-D1 I 0.000
ENSSTOG00000025923 Ictidomys tridecemlineatus ENSSTOG00000025923 I 0.000
ZNF770 Sus scrofa ENSSSCG00000004799 I 0.000
ZNF770 Pan troglodytes ENSPTRG00000023628 I 0.000
ENSPANG00000025699 Papio anubis ENSPANG00000025699 I 0.000
ZNF770 Otolemur garnettii ENSOGAG00000016017 I 0.000
ZNF770 Oryctolagus cuniculus ENSOCUG00000024670 I 0.000
ENSOARG00000000756 Ovis aries ENSOARG00000000756 I 0.000
ENSNLEG00000011204 Nomascus leucogenys ENSNLEG00000011204 I 0.000
ZNF770 Bos taurus ENSBTAG00000040206 I 0.000
ENSMPUG00000019839 Mustela putorius furo ENSMPUG00000019839 I 0.000
ZNF770 Monodelphis domestica ENSMODG00000024233 I 0.000
ZNF770 Loxodonta africana ENSLAFG00000017687 I 0.000
ZNF770 Gorilla gorilla ENSGGOG00000027213 I 0.000
ZNF770 Felis catus ENSFCAG00000024186 I 0.000
ZNF770 Equus caballus ENSECAG00000002556 I 0.000
ENSCSAG00000007169 Chlorocebus sabaeus ENSCSAG00000007169 I 0.000
ZNF770 Callithrix jacchus ENSCJAG00000021013 I 0.000
ZNF770 Canis familiaris ENSCAFG00000029228 I 0.000