ENSBTAP00000004465-D1 (Bos grunniens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ENSBTAP00000004465-D1 T134503_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB43
M04533_2.00 		Homo sapiens
NGTGCCHHNNNNNYAGCACN
NGTGCTRNNNNNDDGGCACN		 SELEX
Yin et al.(2017)
ZBTB43_eDBD_HT-SELEX 		0.822 0.977
ZBTB43
M04534_2.00 		Homo sapiens
NGTGCCHHDNNNNYAGYACN
NGTRCTRNNNNHDDGGCACN		 SELEX
Yin et al.(2017)
ZBTB43_eDBD_Methyl-HT-SELEX 		0.822 0.977
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000004465-D1 C2H2 ZF 375 394
ENSBTAP00000004465-D1 C2H2 ZF 400 422

Links

Other C2H2 ZF family TFs
Other Bos grunniens TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CAMTA5 Arabidopsis thaliana AT4G16150 D
chr4.CM0429.140.nd Lotus japonicus chr4.CM0429.140.nd I
AT3G16940 Arabidopsis thaliana AT3G16940 I
Thhalv10024342m.g Eutrema salsugineum Thhalv10024342m.g I
SapurV1A.0050s0650 Salix purpurea SapurV1A.0050s0650 I
orange1.1g002476m.g Citrus sinensis orange1.1g002476m.g I
MDP0000233860 Malus domestica MDP0000233860 I
MDP0000167705 Malus domestica MDP0000167705 I
MDP0000164873 Malus domestica MDP0000164873 I
Lus10041126.g Linum usitatissimum Lus10041126.g I
Gorai.012G074000 Gossypium raimondii Gorai.012G074000 I
Gorai.011G198600 Gossypium raimondii Gorai.011G198600 I
Gorai.004G075100 Gossypium raimondii Gorai.004G075100 I
evm.TU.supercontig_929.1 Carica papaya evm.TU.supercontig_929.1 I
Ciclev10004273m.g Citrus clementina Ciclev10004273m.g I
Aquca_003_00568 Aquilegia coerulea Aquca_003_00568 I
mgf013655m Mimulus guttatus mgf013655m I
mgf012030m Mimulus guttatus mgf012030m I
Cucsa.325250 Cucumis sativus Cucsa.325250 I
Traes_2AS_4C4190DEB Triticum aestivum Traes_2AS_4C4190DEB I
TCM_021327 Theobroma cacao TCM_021327 I
Sb02g033620 Sorghum bicolor Sb02g033620 I
POPTR_0008s10730 Populus trichocarpa POPTR_0008s10730 I
GRMZM2G032336 Zea mays GRMZM2G032336 I
GLYMA17G03510 Glycine max GLYMA17G03510 I
GLYMA07G37090 Glycine max GLYMA07G37090 I
fgenesh1_pg.C_scaffold_7002321 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7002321 I
Bra038040 Brassica rapa Bra038040 I