CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R001988
(
Geospiza fortis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gfo_R001988
T135674_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R001988
C2H2 ZF
181
202
FKCERCGKVFAYKYYRDKHLKY
Gfo_R001988
C2H2 ZF
213
236
FPCHLCDRSFEKRDRLRIHILHVH
Gfo_R001988
C2H2 ZF
242
264
HKCSTCGKSFSQSSSLNKHMRVH
Gfo_R001988
C2H2 ZF
270
292
YKCVYCNKAFTASSILRTHIRQH
Gfo_R001988
C2H2 ZF
298
321
FKCKHCGKAFASHAAHDSHVRRTH
Gfo_R001988
C2H2 ZF
327
349
CTCSVCGQHFPQQEDYSFHVKIH
Links
Other
C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RPRC002293
Rhodnius prolixus
RPRC002293
N
RPRC007293
Rhodnius prolixus
RPRC007293
N
RPRC007384
Rhodnius prolixus
RPRC007384
N
RPRC008274
Rhodnius prolixus
RPRC008274
N
RPRC009333
Rhodnius prolixus
RPRC009333
N
RPRC009695
Rhodnius prolixus
RPRC009695
N
RPRC010440
Rhodnius prolixus
RPRC010440
N
RPRC010474
Rhodnius prolixus
RPRC010474
N
RPRC010506
Rhodnius prolixus
RPRC010506
N
RPRC010509
Rhodnius prolixus
RPRC010509
N
RPRC010777
Rhodnius prolixus
RPRC010777
N
RPRC011439
Rhodnius prolixus
RPRC011439
N
RPRC012817
Rhodnius prolixus
RPRC012817
N
RPRC014395
Rhodnius prolixus
RPRC014395
N