Gfo_R010087 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R010087 T135807_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB44
M01173_2.00 		Homo sapiens
NNVMTGCAKYN
NRMTGCAKBNN		 PBM
Lambert et al.(2019)
pTH11223 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R010087 C2H2 ZF 399 421
Gfo_R010087 C2H2 ZF 427 449
Gfo_R010087 C2H2 ZF 455 479
Gfo_R010087 C2H2 ZF 487 511

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CAGL0F05995g Candida glabrata CAGL0F05995g D
CAGL0M13189g Candida glabrata CAGL0M13189g D
CaO19.4752 Candida albicans CaO19.4752 D
MSN4 Saccharomyces cerevisiae YKL062W D
MSN2 Saccharomyces cerevisiae YMR037C D
KLLA0_F26961g Kluyveromyces lactis KLLA0_F26961g D
13715_YKL062W Saccharomyces paradoxus 13715_YKL062W I
TDEL_0B06910 Torulaspora delbrueckii TDEL_0B06910 I
TPHA_0C02580 Tetrapisispora phaffii TPHA_0C02580 I
TPHA_0N01460 Tetrapisispora phaffii TPHA_0N01460 I
ZBAI_03527 Zygosaccharomyces bailii ZBAI_03527 I
ZBAI_08525 Zygosaccharomyces bailii ZBAI_08525 I
ZYRO0F01012g Zygosaccharomyces rouxii ZYRO0F01012g I
Scas_Contig649.28 Saccharomyces castellii Scas_Contig649.28 I
Scas_Contig649.29 Saccharomyces castellii Scas_Contig649.29 I
Scas_Contig709.32 Saccharomyces castellii Scas_Contig709.32 I
13440_YKL062W Saccharomyces mikatae 13440_YKL062W I
SU7_2517 Saccharomyces arboricola SU7_2517 I
14538_YKL062W Saccharomyces bayanus 14538_YKL062W I
16548_YMR037C Saccharomyces mikatae 16548_YMR037C I
17169_YMR037C Saccharomyces paradoxus 17169_YMR037C I
17588_YMR037C Saccharomyces bayanus 17588_YMR037C I
KLTH0D08734g Kluyveromyces thermotolerans KLTH0D08734g I
Kwal_8351 Kluyveromyces waltii Kwal_8351 I
SAKL0B11330g Lachancea kluyveri SAKL0B11330g I
Kpol_185p3 Vanderwaltozyma polyspora Kpol_185p3 I
AGOS_ABR089C Ashbya gossypii AGOS_ABR089C I
CaO19.12215 Candida albicans CaO19.12215 I
CD36_08440 Candida dubliniensis CD36_08440 I
Ecym_2301 Eremothecium cymbalariae Ecym_2301 I
KAFR_0A02320 Kazachstania africana KAFR_0A02320 I
KAFR_0F02070 Kazachstania africana KAFR_0F02070 I
KLTH0D08734g Lachancea thermotolerans KLTH0D08734g I
KNAG_0H00550 Kazachstania naganishii KNAG_0H00550 I
KNAG_0M02310 Kazachstania naganishii KNAG_0M02310 I
Kpol_1013p21 Vanderwaltozyma polyspora Kpol_1013p21 I
TBLA_0H02830 Tetrapisispora blattae TBLA_0H02830 I
KUCA_T00000741001 Kuraishia capsulata KUCA_T00000741001 I
LALA0_S09e05358g Lachancea lanzarotensis LALA0_S09e05358g I
NCAS_0A12910 Naumovozyma castellii NCAS_0A12910 I
NCAS_0H03080 Naumovozyma castellii NCAS_0H03080 I
NDAI_0C00560 Naumovozyma dairenensis NDAI_0C00560 I
SKUD_158203 Saccharomyces kudriavzevii SKUD_158203 I
SU7_1995 Saccharomyces arboricola SU7_1995 I
AACERI_AaceriABR089C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABR089C I
TBLA_0G01920 Tetrapisispora blattae TBLA_0G01920 I