Myotis_brandtii_ZNF238_10003031 (Myotis brandtii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Myotis_brandtii_ZNF238_10003031 T136257_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB18
M02916_2.00 		Homo sapiens
VMACATCTGGAWN
NWTCCAGATGTKB		 SELEX
Jolma et al.(2013)
ZNF238_1 		0.827 1.000
ZBTB18
M02917_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Jolma et al.(2013)
ZNF238_2 		0.827 1.000
ZBTB18
M04585_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX 		0.827 1.000
ZBTB18
M08350_2.00 		Homo sapiens
MRCAKCTGG
CCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE 		0.827 1.000
ZBTB18
M08257_2.00 		Homo sapiens
NMGCAGCTGCKB
VMGCAGCTGCKN		 ChIP-seq
Najafabadi et al.(2015b)
ZNF238 		0.827 1.000
ZBTB18
M08928_2.00 		Homo sapiens
VMRCAKCTGGV
BCCAGMTGYKB		 Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C 		0.827 1.000
ZBTB18
M10282_2.00 		Homo sapiens
NNMACATCTGGM
KCCAGATGTKNN		 Transfac
Matys et al.(2006)
V$RP58_01 		0.827 1.000
ZBTB18
M10283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RP58_Q3 		0.827 1.000
ZBTB18
M04586_2.00 		Homo sapiens
NMACATCTGBHNN
NNDVCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Myotis_brandtii_ZNF238_10003031 C2H2 ZF 406 428
Myotis_brandtii_ZNF238_10003031 C2H2 ZF 447 468
Myotis_brandtii_ZNF238_10003031 C2H2 ZF 474 496
Myotis_brandtii_ZNF238_10003031 C2H2 ZF 502 525

Links

Other C2H2 ZF family TFs
Other Myotis brandtii TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fbxo41 Takifugu rubripes ENSTRUG00000001696 N 0.000
fbxo41 Oryzias latipes ENSORLG00000006366 N 0.000
ENSPFOG00000011684 Poecilia formosa ENSPFOG00000011684 N 0.000
ENSPPYG00000012296 Pongo abelii ENSPPYG00000012296 N 0.000
ENSPSIG00000002615 Pelodiscus sinensis ENSPSIG00000002615 N 0.000
Fbxo41 Rattus norvegicus ENSRNOG00000033202 N 0.000
ZNF365 Sorex araneus ENSSARG00000009027 N 0.000
FBXO41 Sorex araneus ENSSARG00000011507 N 0.000
FBXO41 Taeniopygia guttata ENSTGUG00000015356 N 0.000
fbxo41 Tetraodon nigroviridis ENSTNIG00000018046 N 0.000
ENSONIG00000017557 Oreochromis niloticus ENSONIG00000017557 N 0.000
ENSXMAG00000005499 Xiphophorus maculatus ENSXMAG00000005499 N 0.000
Aan_R014934 Calypte anna Aan_R014934 N 0.000
Afo_R006068 Aptenodytes forsteri Afo_R006068 N 0.000
Alligator_sinensis_CCG003358.1 Alligator sinensis Alligator_sinensis_CCG003358.1 N 0.000
Cmyd_10014647 Chelonia mydas Cmyd_10014647 N 0.000
Ogr04473 Ophisaurus gracilis Ogr04473 N 0.000
Ogr08674 Ophisaurus gracilis Ogr08674 N 0.000
fbxo41 Xenopus tropicalis XB-GENE-966908 N 0.000
ENSLACG00000014652 Latimeria chalumnae ENSLACG00000014652 N 0.000
ENSAMXG00000004878 Astyanax mexicanus ENSAMXG00000004878 N 0.000
fbxo41 Danio rerio ENSDARG00000078908 N 0.000
ENSEEUG00000012976 Erinaceus europaeus ENSEEUG00000012976 N 0.000
ENSFALG00000012636 Ficedula albicollis ENSFALG00000012636 N 0.000
FBXO41 Felis catus ENSFCAG00000009398 N 0.000
ZNF365 Homo sapiens ENSG00000138311 N 0.000
fbxo41 Gasterosteus aculeatus ENSGACG00000017614 N 0.000
ENSGALG00000016087 Gallus gallus ENSGALG00000016087 N 0.000
ENSGMOG00000017980 Gadus morhua ENSGMOG00000017980 N 0.000
FBXO41 Anolis carolinensis ENSACAG00000000364 N 0.000
ENSLOCG00000002435 Lepisosteus oculatus ENSLOCG00000002435 N 0.000
ENSLOCG00000006834 Lepisosteus oculatus ENSLOCG00000006834 N 0.000
FBXO41 Meleagris gallopavo ENSMGAG00000013309 N 0.000
FBXO41 Monodelphis domestica ENSMODG00000016969 N 0.000
ENSMPUG00000007635 Mustela putorius furo ENSMPUG00000007635 N 0.000
Fbxo41 Mus musculus ENSMUSG00000047013 N 0.000
ENSOARG00000011843 Ovis aries ENSOARG00000011843 N 0.000
FBXO41 Oryctolagus cuniculus ENSOCUG00000002433 N 0.000