CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ogr16060
(
Ophisaurus gracilis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ogr16060
T136733_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MAZ
M08290_2.00
Homo sapiens
SCCCCKCCC
GGGMGGGGS
ChIP-seq
Schmitges et al.(2016)
P56270_2-4.RCADE
0.779
0.944
MAZ
M08870_2.00
Homo sapiens
YYBYYYYYYCNSYYCCWCCYYN
NRRGGWGGRRSNGRRRRRRVRR
Misc
Kulakovskiy et al.(2013)
MAZ_HUMAN.H11MO.0.A
0.779
0.944
MAZ
M09505_2.00
Homo sapiens
CCCCBCCC
GGGVGGGG
Misc
Heinz et al.(2010)
HepG2-Maz_GSE31477
0.779
0.944
MAZ
M10160_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MAZ_Q5
0.779
0.944
MAZ
M10161_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MAZ_Q6_01
0.779
0.944
MAZ
M10162_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MAZ_Q6
0.779
0.944
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr16060
C2H2 ZF
243
265
HACEMCGKAFRDVYHLNRHKLSH
Ogr16060
C2H2 ZF
271
293
YQCPVCQQRFKRKDRMSYHVRSH
Ogr16060
C2H2 ZF
301
324
YICSHCGKSFSRPDHLNSHVRQVH
Ogr16060
C2H2 ZF
330
352
FKCERCEAAFATKDRLRAHTVRH
Ogr16060
C2H2 ZF
356
377
VPCHVCGKMLSAAYITDHMKVH
Ogr16060
C2H2 ZF
383
406
HVCELCNKGFTTAAYLRVHAVKDH
Ogr16060
C2H2 ZF
416
438
FLCKLCGVHCKTPAQLNGHLQTH
Links
Other
C2H2 ZF
family TFs
Other
Ophisaurus gracilis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Hic2
Mus musculus
ENSMUSG00000050240
I
ENSLACG00000011864
Latimeria chalumnae
ENSLACG00000011864
N
HIC2
Macaca mulatta
ENSMMUG00000031089
N
hic2.L
Xenopus laevis
XB-GENE-960047
N