Pvit_12096 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_12096 T137310_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Maz
M08988_2.00 		Mus musculus
YYBYYYYYYCNSYYCCWCCYYN
NRRGGWGGRRSNGRRRRRRVRR		 Misc
Kulakovskiy et al.(2013)
MAZ_MOUSE.H11MO.0.A 		0.795 0.965
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_12096 C2H2 ZF 238 260
Pvit_12096 C2H2 ZF 266 288
Pvit_12096 C2H2 ZF 296 319
Pvit_12096 C2H2 ZF 325 347
Pvit_12096 C2H2 ZF 351 372

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MAZ Homo sapiens ENSG00000103495 D 0.795
Maz Mus musculus ENSMUSG00000030678 D 0.795
ENSAMEG00000014864 Ailuropoda melanoleuca ENSAMEG00000014864 I 0.795
Myotis_brandtii_MAZ_10014461 Myotis brandtii Myotis_brandtii_MAZ_10014461 I 0.795
ENSBTAP00000026016-D1 Bos grunniens ENSBTAP00000026016-D1 I 0.795
Alligator_sinensis_CCG001391.4 Alligator sinensis Alligator_sinensis_CCG001391.4 I 0.814
ENSSTOG00000027842 Ictidomys tridecemlineatus ENSSTOG00000027842 I 0.795
MAZ Sus scrofa ENSSSCG00000025321 I 0.795
ENSSHAG00000009478 Sarcophilus harrisii ENSSHAG00000009478 I 0.808
Maz Rattus norvegicus ENSRNOG00000055082 I 0.795
MAZ Pan troglodytes ENSPTRG00000007968 I 0.795
MAZ Otolemur garnettii ENSOGAG00000033940 I 0.795
ENSNLEG00000007559 Nomascus leucogenys ENSNLEG00000007559 I 0.795
ENSGMOG00000001761 Gadus morhua ENSGMOG00000001761 I 0.788
ENSGACG00000014840 Gasterosteus aculeatus ENSGACG00000014840 I 0.779
ENSECAG00000024341 Equus caballus ENSECAG00000024341 I 0.795
MAZ Cavia porcellus ENSCPOG00000019886 I 0.795
MAZ Anolis carolinensis ENSACAG00000014698 I 0.827
ENSONIG00000011463 Oreochromis niloticus ENSONIG00000011463 N 0.770
ENSORLG00000000210 Oryzias latipes ENSORLG00000000210 N 0.786
ENSORLG00000006188 Oryzias latipes ENSORLG00000006188 N 0.770
ENSGMOG00000016794 Gadus morhua ENSGMOG00000016794 N 0.770
ENSGACG00000007577 Gasterosteus aculeatus ENSGACG00000007577 N 0.761
ENSTRUG00000004091 Takifugu rubripes ENSTRUG00000004091 N 0.786
si:ch211-166g5.4 Takifugu rubripes ENSTRUG00000008158 N 0.768
ENSXMAG00000018598 Xiphophorus maculatus ENSXMAG00000018598 N 0.770