Pvit_17227 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_17227 T137479_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB2
M04595_2.00 		Homo sapiens
NNTYCCGGTWMH
DKWACCGGRANN		 SELEX
Yin et al.(2017)
ZBTB2_eDBD_HT-SELEX 		0.824 0.985
ZBTB2
M10284_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZBTB2_Q3_01 		0.824 0.985
ZBTB2
M10285_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZBTB2_Q3 		0.824 0.985
ZBTB2
M04596_2.00 		Homo sapiens
GTTTCCGGTAMY
RKTACCGGAAAC		 SELEX
Yin et al.(2017)
ZBTB2_eDBD_Methyl-HT-SELEX 		0.824 0.985
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_17227 C2H2 ZF 362 384
Pvit_17227 C2H2 ZF 389 410
Pvit_17227 C2H2 ZF 447 467

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Smp_168600 Schistosoma mansoni Smp_168600 N
Sjc_0113400 Schistosoma japonicum Sjc_0113400 N
A_06446 Schistosoma haematobium A_06446 N